Evidence map›Paper›PMID 31462300›Full record

ArticleClinical epigenetics2019

High-resolution analysis of germ cells from men with sex chromosomal aneuploidies reveals normal transcriptome but impaired imprinting.

Sandra Laurentino, Laura Heckmann, Sara Di Persio, Xiaolin Li, Gerd Meyer Zu Hörste, Joachim Wistuba, Jann-Frederik Cremers, Jörg Gromoll, Sabine Kliesch, Stefan Schlatt and 1 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Sandra LaurentinoCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Laura HeckmannCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Sara Di PersioCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Xiaolin LiDepartment of Neurology, Institute of Translational Neurology, University Hospital of Münster, Münster, Germany.
Gerd Meyer Zu HörsteDepartment of Neurology, Institute of Translational Neurology, University Hospital of Münster, Münster, Germany.
Joachim WistubaCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Jann-Frederik CremersCentre of Reproductive Medicine and Andrology, Department of Clinical and Surgical Andrology, University of Münster, Münster, Germany.
Jörg GromollCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Sabine KlieschCentre of Reproductive Medicine and Andrology, Department of Clinical and Surgical Andrology, University of Münster, Münster, Germany.
Stefan SchlattCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany.
Nina NeuhausCentre of Reproductive Medicine and Andrology, University of Münster, Domagkstrasse 11, 48149, Münster, Germany. Nina.Neuhaus@ukmuenster.de.ORCID 0000-0003-0181-6194
University of Münster · DEUniversity Hospital Münster · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe most common sex chromosomal aneuploidy in males is Klinefelter syndrome, which is characterized by at least one supernumerary X chromosome. While these men have long been considered infertile, focal spermatogenesis can be observed in some patients, and sperm can be surgically retrieved and used for artificial reproductive techniques. Although these gametes can be used for fertility treatments, little is known about the molecular biology of the germline in Klinefelter men. Specifically, it is unclear if germ cells in Klinefelter syndrome correctly establish the androgenetic DNA methylation profile and transcriptome. This is due to the low number of germ cells in the Klinefelter testes available for analysis.

resultsHere, we overcame these difficulties and successfully investigated the epigenetic and transcriptional profiles of germ cells in Klinefelter patients employing deep bisulfite sequencing and single-cell RNA sequencing. On the transcriptional level, the germ cells from Klinefelter men clustered together with the differentiation stages of normal spermatogenesis. Klinefelter germ cells showed a normal DNA methylation profile of selected germ cell-specific markers compared with spermatogonia and sperm from men with normal spermatogenesis. However, germ cells from Klinefelter patients showed variations in the DNA methylation of imprinted regions.

conclusionsThese data indicate that Klinefelter germ cells have a normal transcriptome but might present aberrant imprinting, showing impairment in germ cell development that goes beyond mere germ cell loss.

Indexed as

DNA MethylationGenomic ImprintingEpigenesis, GeneticGene Expression ProfilingGerm CellsHigh-Throughput Nucleotide SequencingHumansKlinefelter SyndromeMaleSequence Analysis, RNASingle-Cell AnalysisDeep bisulfite sequencingDNA methylationKlinefelter syndromeMale germlineSex chromosome aneuploidySingle-cell analysisSpermSpermatogonia

Identifiers

PMID31462300
PMCPMC6714305
OpenAlexW2971175367

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.