Evidence map›Paper›PMID 31462217›Full record

ArticleBMC genomics2019

Natural allelic variations of Saccharomyces cerevisiae impact stuck fermentation due to the combined effect of ethanol and temperature; a QTL-mapping study.

Philippe Marullo, Pascal Durrens, Emilien Peltier, Margaux Bernard, Chantal Mansour, Denis Dubourdieu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Genomic Adaptations ofMicroorganisms · 2022
    Review
  4. Truth in wine yeast.Microbial biotechnology · 2022
    Review
  5. Article
  6. Marker Assisted Selection of Malic-ConsumingJournal of fungi (Basel, Switzerland) · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Philippe MarulloUniversity of Bordeaux, ISVV, Unité de recherche OEnologie EA 4577, USC 1366 INRA, 33140, Bordeaux INP, Villenave d'Ornon, France. philippe.marullo@u-bordeaux.fr.ORCID http://orcid.org/0000-0002-3594-5173
Pascal DurrensCNRS UMR 5800, University of Bordeaux, 33405, Talence, France.
Emilien PeltierUniversity of Bordeaux, ISVV, Unité de recherche OEnologie EA 4577, USC 1366 INRA, 33140, Bordeaux INP, Villenave d'Ornon, France.
Margaux BernardUniversity of Bordeaux, ISVV, Unité de recherche OEnologie EA 4577, USC 1366 INRA, 33140, Bordeaux INP, Villenave d'Ornon, France.
Chantal MansourBiolaffort, 33100, Bordeaux, France.
Denis DubourdieuUniversity of Bordeaux, ISVV, Unité de recherche OEnologie EA 4577, USC 1366 INRA, 33140, Bordeaux INP, Villenave d'Ornon, France.
Université de Bordeaux · FRCentre National de la Recherche Scientifique · FR

Funding

Secrétariat Général pour les Affaires Régionales, Etat en Région Aquitaine (FR) SAGESSE
6 · The paper itself

Abstract

backgroundFermentation completion is a major prerequisite in many industrial processes involving the bakery yeast Saccharomyces cerevisiae. Stuck fermentations can be due to the combination of many environmental stresses. Among them, high temperature and ethanol content are particularly deleterious especially in bioethanol and red wine production. Although the genetic causes of temperature and/or ethanol tolerance were widely investigated in laboratory conditions, few studies investigated natural genetic variations related to stuck fermentations in high gravity matrixes.

resultsIn this study, three QTLs linked to stuck fermentation in winemaking conditions were identified by using a selective genotyping strategy carried out on a backcrossed population. The precision of mapping allows the identification of two causative genes VHS1 and OYE2 characterized by stop-codon insertion. The phenotypic effect of these allelic variations was validated by Reciprocal Hemyzygous Assay in high gravity fermentations (> 240 g/L of sugar) carried out at high temperatures (> 28 °C). Phenotypes impacted were mostly related to the late stage of alcoholic fermentation during the stationary growth phase of yeast.

conclusionsOur findings illustrate the complex genetic determinism of stuck fermentation and open new avenues for better understanding yeast resistance mechanisms involved in high gravity fermentations.

Indexed as

FermentationTemperatureAllelesChromosome MappingEthanolNADPH DehydrogenasePhenotypeProtein Serine-Threonine KinasesQuantitative Trait LociSaccharomyces cerevisiaeSugarsWhole Genome SequencingWineEthanolNADPH DehydrogenaseProtein Serine-Threonine KinasesSugarsEthanolOYE2QTLSubtelomeric regionTemperatureVHS1Wine yeast

Identifiers

PMID31462217
PMCPMC6714461
OpenAlexW2970893205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.