Evidence map›Paper›PMID 31457096›Full record

ArticleScience advances2019

Discriminative T cell recognition of cross-reactive islet-antigens is associated with HLA-DQ8 transdimer-mediated autoimmune diabetes.

I-Ting Chow, Theresa J Gates, George K Papadopoulos, Antonis K Moustakas, Elizabeth M Kolawole, Richard J Notturno, John W McGinty, Nadia Torres-Chinn, Eddie A James, Carla Greenbaum and 3 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Breakdown and Repair of Peripheral Immune Tolerance in Type 1 Diabetes.Cold Spring Harbor perspectives in medicine · 2024
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. A gut microbial peptide and molecular mimicry in the pathogenesis of type 1 diabetes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Article
  13. Observational
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

I-Ting ChowBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.ORCID 0000-0001-7278-8157
Theresa J GatesBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.
George K PapadopoulosLaboratory of Biophysics, Biochemistry, Bioprocessing and Bioproducts, Faculty of Agricultural Technology, Technological Educational Institute of Epirus, GR47100 Arta, Greece.ORCID 0000-0002-6944-6591
Antonis K MoustakasDepartment of Food Technology, Ionian University, GR28100 Argostoli, Cephallonia, Greece.
Elizabeth M KolawoleDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.ORCID 0000-0003-3138-0037
Richard J NotturnoBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.ORCID 0000-0002-1348-6359
John W McGintyBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.
Nadia Torres-ChinnBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.
Eddie A JamesBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.ORCID 0000-0002-7217-5729
Carla GreenbaumBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.
Gerald T NepomBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.ORCID 0000-0002-8063-1464
Brian D EvavoldDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.ORCID 0000-0002-3561-3494
William W KwokBenaroya Research Institute at Virginia Mason, 1201 9th Ave., Seattle, WA 98101, USA.ORCID 0000-0003-4843-4599
Virginia Mason Medical Center · USUniversity of Utah · USTechnological Educational Institute of Epirus · GRTechnological Educational Institute of the Ionian Islands · GR

Funding

Mechanisms for HLA-DQ mediated disease protection and susceptibilityDP3DK097653 · NIDDK · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI KWOK, WILLIAM W. · 2012 to 2012
$3.5M
Phenotypic Analysis of Islet Antigen-specific Effector T Cells in Pre-diabetic SubjectsDP3DK106909 · NIDDK · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI KWOK, WILLIAM W. · 2015 to 2015
$2.2M
NIDDK NIH HHS DP3 DK097653NIDDK NIH HHS DP3 DK106909
6 · The paper itself

Abstract

Human leukocyte antigen (HLA)-DQ8 transdimer (HLA-DQA1*0501/DQB1*0302) confers exceptionally high risk in autoimmune diabetes. However, little is known about HLA-DQ8 transdimer-restricted CD4 T cell recognition, an event crucial for triggering HLA-DQ8 transdimer-specific anti-islet immunity. Here, we report a high degree of epitope overlap and T cell promiscuity between susceptible HLA-DQ8 and HLA-DQ8 transdimer. Despite preservation of putative residues for T cell receptor (TCR) contact, stronger disease-associated responses to cross-reactive, immunodominant islet epitopes are elicited by HLA-DQ8 transdimer. Mutagenesis at the α chain of HLA-DQ8 transdimer in complex with the disease-relevant GAD65

Indexed as

AllelesAmino Acid SequenceAutoantigensCross ReactionsDiabetes Mellitus, Type 1EpitopesHLA-DQ AntigensHumansIslets of LangerhansModels, MolecularProtein MultimerizationStructure-Activity RelationshipT-Cell Antigen Receptor SpecificityT-LymphocytesAutoantigensEpitopesHLA-DQ8 antigenHLA-DQ Antigens

Identifiers

PMID31457096
PMCPMC6703875
OpenAlexW2969904072

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.