Evidence map›Paper›PMID 31457023›Full record

ArticleIranian journal of biotechnology2018

Genome-Scale Metabolic Network Models of Bacillus Species Suggest that Model Improvement is Necessary for Biotechnological Applications.

Tahereh Ghasemi-Kahrizsangi, Sayed-Amir Marashi, Zhaleh Hosseini

Open access · greenAbstract read
In one paragraph

Article in Iranian journal of biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. New Insights on Metabolic Features ofInternational journal of molecular sciences · 2023
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tahereh Ghasemi-KahrizsangiDepartment of Biotechnology, College of Science, University of Tehran, Tehran, Iran.
Sayed-Amir MarashiDepartment of Biotechnology, College of Science, University of Tehran, Tehran, Iran.
Zhaleh HosseiniDepartment of Biotechnology, College of Science, University of Tehran, Tehran, Iran.
University of Tehran · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA genome-scale metabolic network model (GEM) is a mathematical representation of an organism's metabolism. Today, GEMs are popular tools for computationally simulating the biotechnological processes and for predicting biochemical properties of (engineered) strains.

objectivesIn the present study, we have evaluated the predictive power of two GEMs, namely MATERIALS AND

methodsFor comparing the predictive power of

resultsBy using the wealth of data in the literature, we evaluated the accuracy of

conclusionsOur analysis suggests that literature-based improvement of genome-scale metabolic network models of the two

Indexed as

Bacillus SpeciesBiochemical capabilityComputational biotechnologyModel validationSystems biology

Identifiers

PMID31457023
PMCPMC6697824
OpenAlexW2888852344

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.