Evidence map›Paper›PMID 31455847›Full record

ArticleScientific reports2019

Identification of pathways that regulate circadian rhythms using a larval zebrafish small molecule screen.

Eric A Mosser, Cindy N Chiu, T Katherine Tamai, Tsuyoshi Hirota, Suna Li, May Hui, Amy Wang, Chanpreet Singh, Andrew Giovanni, Steve A Kay and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  10. Heliyon · 2024
    Article
  11. Article
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  14. Article
  15. Immunity, Infection, and the Zebrafish Clock.Infection and immunity · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Eric A MosserDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Cindy N ChiuDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
T Katherine TamaiCentre for Cell and Molecular Dynamics, Department of Cell and Developmental Biology, University College London, London, WC1E 6BT, United Kingdom.
Tsuyoshi HirotaPRESTO, JST, Nagoya, 464-8601, Japan.ORCID http://orcid.org/0000-0003-4876-3608
Suna LiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.ORCID http://orcid.org/0000-0002-3431-0061
May HuiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Amy WangDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Chanpreet SinghDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Andrew GiovanniSunovion Pharmaceuticals, Marlborough, MA, 01752, USA.
Steve A KayDepartment of Neurology, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA.
David A ProberDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA. dprober@caltech.edu.ORCID http://orcid.org/0000-0002-7371-4675
California Institute of Technology · USNorthwestern University · USMRC Laboratory for Molecular Cell Biology · GBNagoya University · JPSunovion (United States) · USUniversity of Southern California · US

Funding

Role of Prokineticin 2 in Regulating Sleep in ZebrafishR01NS095824 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI PROBER, DAVID AARON · 2017 to 2021
$1.8M
Circadian Regulation of Zebrafish Sleep by MelatoninR01NS101665 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI PROBER, DAVID AARON · 2017 to 2020
$1.4M
NINDS NIH HHS R01 NS095824NINDS NIH HHS R01 NS101665
6 · The paper itself

Abstract

The circadian clock ensures that behavioral and physiological processes occur at appropriate times during the 24-hour day/night cycle, and is regulated at both the cellular and organismal levels. To identify pathways acting on intact animals, we performed a small molecule screen using a luminescent reporter of molecular circadian rhythms in zebrafish larvae. We identified both known and novel pathways that affect circadian period, amplitude and phase. Several drugs identified in the screen did not affect circadian rhythms in cultured cells derived from luminescent reporter embryos or in established zebrafish and mammalian cell lines, suggesting they act via mechanisms absent in cell culture. Strikingly, using drugs that promote or inhibit inflammation, as well as a mutant that lacks microglia, we found that inflammatory state affects circadian amplitude. These results demonstrate a benefit of performing drug screens using intact animals and provide novel targets for treating circadian rhythm disorders.

Indexed as

AnimalsAnimals, Genetically ModifiedAnti-Inflammatory Agents, Non-SteroidalCasein Kinase ICircadian RhythmLarvaProtein Kinase InhibitorsReceptors, GlycineSmall Molecule LibrariesTaurineZebrafishZebrafish ProteinsAnti-Inflammatory Agents, Non-SteroidalCasein Kinase IProtein Kinase InhibitorsReceptors, GlycineSmall Molecule LibrariesTaurineZebrafish Proteins

Identifiers

PMID31455847
PMCPMC6712016
OpenAlexW2970514148

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.