Evidence map›Paper›PMID 31452163›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2020

A Novel Method to Silence Genes in Cryptosporidium.

Alejandro Castellanos-Gonzalez

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. A comparative study of microRNAs in different stages ofFrontiers in veterinary science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Alejandro Castellanos-GonzalezInfectious Disease Division, Department of Internal Medicine, University of Texas Medical Branch, Galveston, TX, USA. alcastel@utmb.edu.

Funding

Development of a rapid method to silence genes in CryptosporidiumR21AI126275 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI CASTELLANOS-GONZALEZ, ALEJANDRO · 2016 to 2017
$426k
NIAID NIH HHS R21 AI126275
6 · The paper itself

Abstract

The parasites of the genus Cryptosporidium are important causes of diarrheal diseases, specifically cryptosporidiosis, worldwide. A major bottleneck for developing drugs and vaccines against cryptosporidiosis is the lack of methods to study gene function in this parasite. Silencing of genes by RNA interference (RNAi) is a powerful method to investigate gene function that has been widely used in the identification of targets for several pathogens. Unfortunately, as Cryptosporidium does not possess the enzymes of the RNAi pathway, its genes cannot be silenced by standard siRNA technology. To circumvent that problem, we have developed a novel strategy to knock down Cryptosporidium genes by reconstituting the effector arm of the siRNA pathway. We have induced silencing of several genes in Cryptosporidium by transfecting parasites with hybrid complexes formed between recombinant human Argonaute (hAgo2) and Cryptosporidium single-stranded RNA (ssRNA). This novel methodology provides an effective strategy to study the role of selected genes in host-parasite interactions, and also can be used to identify potential targets for chemotherapy. The standardized methodology based on this strategy is described in this chapter.

Indexed as

RNA InterferenceArgonaute ProteinsCryptosporidiumGene Knockdown TechniquesRecombinant ProteinsRNA, ProtozoanRNA, Small InterferingTransfectionWorkflowAGO2 protein, humanArgonaute ProteinsRecombinant ProteinsRNA, ProtozoanRNA, Small InterferingCryptosporidiumGene silencingRNAi

Identifiers

PMID31452163
PMCPMC6778316

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.