Evidence map›Paper›PMID 31451937›Full record

ArticleWorld journal of microbiology & biotechnology2019

Transcriptional regulation contributes more to Monascus pigments diversity in different strains than to DNA sequence variation.

Xiaoyu Guo, Yao Li, Rui Zhang, Jiyuan Yu, Xinbao Ma, Mianhua Chen, Yurong Wang

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xiaoyu GuoState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Yao LiState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Rui ZhangState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Jiyuan YuState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Xinbao MaState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Mianhua ChenState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China.
Yurong WangState Key Laboratory of Food Nutrition and Safety, Tianjin University of Science & Technology, Tianjin, 300457, People's Republic of China. wangyurong@tust.edu.cn.ORCID http://orcid.org/0000-0003-3988-2808
Tianjin University of Science and Technology · CN

Funding

Laboratory Innovation Fund of Tianjin University of Science & Technology 1703A303Major Program of National Natural Science Foundation of China No. 31330059National Natural Science Foundation of China No. 31571820Open Project Program of State Key Laboratory of Food Nutrition and Safety No. SKLFNS-KF-201809
6 · The paper itself

Abstract

Monascus azaphilone pigments, including red, orange, and yellow, are world-famous food colorants. However, the pigments produced by different Monascus species vary in yields and compositions. The underlying mechanism is unclear. In this study, four wild-type Monascus strains, namely M. anka M7, M. purpureus M9, M. ruber C100, and M. aurantiacus M15, were selected as research objects according to the diversification of their pigments fermented in the same mediums and conditions. Twenty-three 3 kbp segments (300 bp overlap with adjacent segments) of the pigment gene cluster were amplified, sequenced, and assembled into the DNA sequences of the clusters. The DNA sequences of pigment biosynthetic gene clusters of the four strains showed 99.94% similarity according to the results of multiple alignment. The expression levels of 17 pigment biosynthetic genes of four strains were determined by using real-time quantitative PCR. The transcriptional regulation contributed more than the DNA sequence variation in Monascus pigments metabolism. Our result gives insight into the study of Monascus pigment biosynthesis.

Indexed as

Transcription, GeneticAmino Acid SequenceBase SequenceColorDNA, FungalFungal ProteinsGene Expression Regulation, FungalGenetic VariationMonascusMultigene FamilyPhylogenyPigments, BiologicalDNA, FungalFungal ProteinsPigments, BiologicalGene expressionMonascus pigmentsPCR amplificationPigment biosynthetic gene cluster

Identifiers

PMID31451937
OpenAlexW2971097910

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.