Evidence map›Paper›PMID 31451716›Full record

ArticleJournal of human genetics2019

Identification of extremely rare mitochondrial disorders by whole exome sequencing.

Go Hun Seo, Arum Oh, Eun Na Kim, Yeonmi Lee, Jumi Park, Taeho Kim, Young-Min Lim, Gu-Hwan Kim, Chong Jai Kim, Han-Wook Yoo and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Go Hun SeoDepartment of Pediatrics, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Arum OhDepartment of Pediatrics, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Eun Na KimDepartment of Pathology, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Yeonmi LeeAsan Medical Center Children's Hospital, Stem Cell Center, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Jumi ParkAsan Medical Center Children's Hospital, Stem Cell Center, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Taeho KimBiomedical Research Center, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Young-Min LimDepartment of Neurology, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Gu-Hwan KimMedical Genetics Center, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Chong Jai KimDepartment of Pathology, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Han-Wook YooDepartment of Pediatrics, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Eunju KangAsan Medical Center Children's Hospital, Stem Cell Center, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea. kangeun@amc.seoul.kr.
Beom Hee LeeDepartment of Pediatrics, ASAN Institute for Life Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea. bhlee@amc.seoul.kr.
Ulsan College · KRAsan Medical Center · KRUniversity of Ulsan · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole exome sequencing (WES) is an effective tool for the genetic diagnosis of mitochondrial disorders due to various nuclear genetic defects. In this study, three patients affected by extremely rare mitochondrial disorders caused by nuclear genetic defects are described. The medical records of each patient were reviewed to obtain clinical symptoms, results of biochemical and imaging studies, and muscle biopsies. WES and massive parallel sequencing of whole mtDNA were performed for each patient. The oxygen consumption rate (OCR) and complex activity I and IV was measured. Patients 1 and 2 had exhibited global developmental delay and seizure since early infancy. Blood lactate, the lactate-to-pyruvate ratio, and urinary excretion of Krebs cycle intermediates were markedly elevated. Patient 1 also was noted for ophthalmoplegia. Patient 2 had left ventricular hypertrophy and ataxia. Patient 3 developed dysarthria, gait disturbance, and right-side weakness at age 29. Brain magnetic resonance imaging demonstrated abnormal signal intensity involving the bilateral thalami, midbrain, or pons. Based on WES, patient 1 had p.Glu415Gly and p.Arg484Trp variants in MTO1. In patient 2, p.Gln111ThrfsTer5 and RNA mis-splicing were identified in TSFM. Patient 3 carried p.Met151Thr and p.Met246Lys variants in AARS2. Skin fibroblasts of three patients exhibited decreased OCRs and complex 1 activity, and mitochondrial DNA was normal. These results demonstrate the utility of WES for identifying the genetic cause of extremely rare mitochondrial disorders, which has implications for genetic counseling.

Indexed as

AdultAlanine-tRNA LigaseBrainChildDNA, MitochondrialDysarthriaExomeExome SequencingHigh-Throughput Nucleotide SequencingHumansHypertrophy, Left VentricularMagnetic Resonance ImagingMaleMitochondriaMitochondrial DiseasesMitochondrial ProteinsAARS2 protein, humanAlanine-tRNA LigaseDNA, MitochondrialMitochondrial ProteinsMTO1 protein, humanPeptide Elongation FactorsRNA-Binding ProteinsTSFM protein, human

Identifiers

PMID31451716
OpenAlexW2969485591

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.