Evidence map›Paper›PMID 31451684›Full record

ArticleNature communications2019

A conserved regulatory program initiates lateral plate mesoderm emergence across chordates.

Karin D Prummel, Christopher Hess, Susan Nieuwenhuize, Hugo J Parker, Katherine W Rogers, Iryna Kozmikova, Claudia Racioppi, Eline C Brombacher, Anna Czarkwiani, Dunja Knapp and 12 more

Abstract readVideo-Audio Media
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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  14. bioRxiv : the preprint server for biology · 2023
    Article
  15. Article
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  17. Article
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  19. Article
  20. Overview of Head Muscles with Special Emphasis on Extraocular Muscle Development.Advances in anatomy, embryology, and cell biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Karin D PrummelInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Christopher HessInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Susan NieuwenhuizeInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Hugo J ParkerDepartment of Anatomy and Cell Biology, Kansas University Medical Center, Kansas City, KS, 66160, USA.ORCID http://orcid.org/0000-0001-7646-2007
Katherine W RogersFriedrich Miescher Laboratory of the Max Planck Society, Tübingen, 72076, Germany.
Iryna KozmikovaInstitute of Molecular Genetics of the ASCR, Prague, 142 20, Czech Republic.
Claudia RacioppiCenter for Developmental Genetics, Department of Biology, New York University, New York, NY, 10003, USA.
Eline C BrombacherInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Anna CzarkwianiTUD-CRTD Center for Regenerative Therapies Dresden, Dresden, 01307, Germany.ORCID http://orcid.org/0000-0002-8845-3113
Dunja KnappTUD-CRTD Center for Regenerative Therapies Dresden, Dresden, 01307, Germany.ORCID http://orcid.org/0000-0002-7533-2208
Sibylle BurgerInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Elena ChiavacciInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Gopi ShahMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, 01307, Germany.ORCID http://orcid.org/0000-0002-0154-9455
Alexa BurgerInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland.
Jan HuiskenMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, 01307, Germany.ORCID http://orcid.org/0000-0001-7250-3756
Maximina H YunTUD-CRTD Center for Regenerative Therapies Dresden, Dresden, 01307, Germany.ORCID http://orcid.org/0000-0001-9019-2453
Lionel ChristiaenCenter for Developmental Genetics, Department of Biology, New York University, New York, NY, 10003, USA.ORCID http://orcid.org/0000-0001-5930-5667
Zbynek KozmikInstitute of Molecular Genetics of the ASCR, Prague, 142 20, Czech Republic.
Patrick MüllerFriedrich Miescher Laboratory of the Max Planck Society, Tübingen, 72076, Germany.ORCID http://orcid.org/0000-0002-0702-6209
Marianne BronnerDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, USA.
Robb KrumlaufDepartment of Anatomy and Cell Biology, Kansas University Medical Center, Kansas City, KS, 66160, USA.
Christian MosimannInstitute of Molecular Life Sciences, University of Zurich, Zürich, 8057, Switzerland. christian.mosimann@imls.uzh.ch.ORCID http://orcid.org/0000-0002-0749-2576

Funding

Regulation of muscle fate specification and cell migration in cardiogenic lineageR01HL108643 · NHLBI · NEW YORK UNIVERSITY · PI MOGILNER, ALEXANDER · 2011 to 2023
$5.4M
NHLBI NIH HHS R01 HL108643
6 · The paper itself

Abstract

Cardiovascular lineages develop together with kidney, smooth muscle, and limb connective tissue progenitors from the lateral plate mesoderm (LPM). How the LPM initially emerges and how its downstream fates are molecularly interconnected remain unknown. Here, we isolate a pan-LPM enhancer in the zebrafish-specific draculin (drl) gene that provides specific LPM reporter activity from early gastrulation. In toto live imaging and lineage tracing of drl-based reporters captures the dynamic LPM emergence as lineage-restricted mesendoderm field. The drl pan-LPM enhancer responds to the transcription factors EomesoderminA, FoxH1, and MixL1 that combined with Smad activity drive LPM emergence. We uncover specific activity of zebrafish-derived drl reporters in LPM-corresponding territories of several chordates including chicken, axolotl, lamprey, Ciona, and amphioxus, revealing a universal upstream LPM program. Altogether, our work provides a mechanistic framework for LPM emergence as defined progenitor field, possibly representing an ancient mesodermal cell state that predates the primordial vertebrate embryo.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, DevelopmentalAnimalsEmbryonic InductionEmbryo, NonmammalianGastrulationIntravital MicroscopyMesodermZebrafishZebrafish ProteinsZebrafish Proteins

Identifiers

PMID31451684
PMCPMC6710290

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.