Evidence map›Paper›PMID 31451291›Full record

ArticleHuman immunology2019

A survey of known immune epitopes in the enteroviruses strains associated with acute flaccid myelitis.

Alba Grifoni, Swapnil Mahajan, John Sidney, Sheridan Martini, Richard H Scheuermann, Bjoern Peters, Alessandro Sette

Open access · greenAbstract read
In one paragraph

Article in Human immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Trial
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  6. How persistent infection overcomes peripheral tolerance mechanisms to cause T cell-mediated autoimmune disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  8. Observational
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  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Alba GrifoniDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA. Electronic address: agrifoni@lji.org.
Swapnil MahajanDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA.
John SidneyDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA.
Sheridan MartiniDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA.
Richard H ScheuermannDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA; J. Craig Venter Institute, La Jolla, CA 92037, USA; Department of Pathology, University of California, San Diego, CA 92093, USA.
Bjoern PetersDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA; Department of Medicine, University of California, San Diego, CA 92093, USA.
Alessandro SetteDivision of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, CA 92037, USA; Department of Medicine, University of California, San Diego, CA 92093, USA.
La Jolla Institute for Immunology · USUniversity of California, San Diego · US

Funding

IMMUNE EPITOPE AND ANALYSIS PROGRAM: Transplantation of organs, tissues and cells 75N93019C00001 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI WILSON, STEPHEN · 2019 to 2025
$23.1M
NIAID NIH HHS 75N93019C00001
6 · The paper itself

Abstract

Enteroviruses are potentially linked to the emergence of Acute Flaccid Myelitis (AFM), a rare but very serious condition that affects the nervous system. AFM has been associated with coxsackievirus A16, enterovirus A71 (EVA71) and enterovirus D68 (EVD68). Little is known about host-pathogen interactions for these viruses, and whether immune responses may have a protective or immunopathological role in disease presentations. Towards addressing this issue, we used the Immune Epitope Database to assess the known inventory of B and T cell epitopes from enteroviruses, focusing on data related to human hosts. The extent of conservation in areas that are targets of B and T cell immune responses were examined. This analysis sheds light on regions of the enterovirus polypeptide that can be probed to induce a specific or cross-reactive B or T cell the immune response to enteroviruses, with a particular focus on coxsackievirus A16, EVA71 and EVD68. In addition, these analyses reveal the current gap-of-knowledge in the T and B cell immune responses that future studies should aim to address.

Indexed as

Antigens, ViralB-LymphocytesCentral Nervous System Viral DiseasesComputational BiologyCoxsackievirus InfectionsCross ReactionsEnterovirus A, HumanEnterovirus D, HumanEpitope MappingHost-Pathogen InteractionsHumansImmunity, CellularImmunodominant EpitopesMyelitisNeuromuscular DiseasesReceptors, AntigenAntigens, ViralImmunodominant EpitopesReceptors, AntigenAFMB cellsEnterovirusesEpitopesT cells

Identifiers

PMID31451291
PMCPMC6876747
OpenAlexW2969361153

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.