Evidence map›Paper›PMID 31449058›Full record

ArticleThe Journal of clinical investigation2019

Polymerase δ deficiency causes syndromic immunodeficiency with replicative stress.

Cecilia Domínguez Conde, Özlem Yüce Petronczki, Safa Baris, Katharina L Willmann, Enrico Girardi, Elisabeth Salzer, Stefan Weitzer, Rico Chandra Ardy, Ana Krolo, Hanna Ijspeert and 11 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in The Journal of clinical investigation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

  1. Monogenic etiologies of persistent human papillomavirus infections: A comprehensive systematic review.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Pooled it
  2. Article
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  8. Article
  9. Review
  10. Transferrin Receptor-Mediated Iron Uptake Promotes Colon Tumorigenesis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  11. Review
  12. Article
  13. Article
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  15. NovelJournal of medical genetics · 2022
    Article
  16. Article
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  18. Article
  19. Genomic Instability and Cancer Risk Associated with Erroneous DNA Repair.International journal of molecular sciences · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 6 countries.

Cecilia Domínguez CondeLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Özlem Yüce PetronczkiLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Safa BarisPediatric Allergy and Immunology, Marmara University, Faculty of Medicine, Istanbul, Turkey.
Katharina L WillmannLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Enrico GirardiCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, and.
Elisabeth SalzerLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Stefan WeitzerCenter for Medical Biochemistry, Medical University of Vienna, Vienna, Austria.
Rico Chandra ArdyLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Ana KroloLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Hanna IjspeertDepartment of Pediatrics, Laboratory for Immunology, Leiden University Medical Centre, Leiden, Netherlands.
Ayca KiykimPediatric Allergy and Immunology, Marmara University, Faculty of Medicine, Istanbul, Turkey.
Elif Karakoc-AydinerPediatric Allergy and Immunology, Marmara University, Faculty of Medicine, Istanbul, Turkey.
Elisabeth Förster-WaldlDepartment of Neonatology, Pediatric Intensive Care and Neuropediatrics, Department of Pediatrics and Adolescent Medicine.
Leo KagerSt. Anna Children's Hospital, Department of Pediatrics and Adolescent Medicine, Vienna, Austria.
Winfried F PicklInstitute of Immunology, Center for Pathophysiology, Infectiology and Immunology, and.
Giulio Superti-FurgaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, and.
Javier MartínezCenter for Medical Biochemistry, Medical University of Vienna, Vienna, Austria.
Joanna I LoizouCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, and.
Ahmet OzenPediatric Allergy and Immunology, Marmara University, Faculty of Medicine, Istanbul, Turkey.
Mirjam van der BurgDepartment of Pediatrics, Laboratory for Immunology, Leiden University Medical Centre, Leiden, Netherlands.
Kaan BoztugLudwig Boltzmann Institute for Rare and Undiagnosed Diseases.
Austrian Academy of Sciences · ATJeffrey Modell Foundation · AULeiden University Medical Center · NLMedical University of Vienna · ATChild, Adolescent and Family Mental Health · CAInstitute of Immunology · HRSt Anna Children's Hospital · AT

Funding

Wellcome Trust
6 · The paper itself

Abstract

Polymerase δ is essential for eukaryotic genome duplication and synthesizes DNA at both the leading and lagging strands. The polymerase δ complex is a heterotetramer comprising the catalytic subunit POLD1 and the accessory subunits POLD2, POLD3, and POLD4. Beyond DNA replication, the polymerase δ complex has emerged as a central element in genome maintenance. The essentiality of polymerase δ has constrained the generation of polymerase δ-knockout cell lines or model organisms and, therefore, the understanding of the complexity of its activity and the function of its accessory subunits. To our knowledge, no germline biallelic mutations affecting this complex have been reported in humans. In patients from 2 independent pedigrees, we have identified what we believe to be a novel syndrome with reduced functionality of the polymerase δ complex caused by germline biallelic mutations in POLD1 or POLD2 as the underlying etiology of a previously unknown autosomal-recessive syndrome that combines replicative stress, neurodevelopmental abnormalities, and immunodeficiency. Patients' cells showed impaired cell-cycle progression and replication-associated DNA lesions that were reversible upon overexpression of polymerase δ. The mutations affected the stability and interactions within the polymerase δ complex or its intrinsic polymerase activity. We believe our discovery of human polymerase δ deficiency identifies the central role of this complex in the prevention of replication-related DNA lesions, with particular relevance to adaptive immunity.

Indexed as

Germ-Line MutationAdolescentAllelesAmino Acid SubstitutionDNA Polymerase IIIDNA ReplicationEnzyme StabilityGenes, RecessiveHumansImmunologic Deficiency SyndromesMaleModels, MolecularMultienzyme ComplexesMutation, MissenseNeurodevelopmental DisordersPedigreeDNA Polymerase IIIMultienzyme ComplexesPOLD1 protein, humanPOLD2 protein, humanRecombinant ProteinsAdaptive immunityDNA repairGenetic diseasesGeneticsImmunology

Identifiers

PMID31449058
PMCPMC6763221
OpenAlexW2969745156

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.