Evidence map›Paper›PMID 31448843›Full record

ArticleHuman mutation2019

From incomplete penetrance with normal telomere length to severe disease and telomere shortening in a family with monoallelic and biallelic PARN pathogenic variants.

Lois M Dodson, Alessandro Baldan, Mikael Nissbeck, Sethu M R Gunja, Penelope E Bonnen, Geraldine Aubert, Sherri Birchansky, Anders Virtanen, Alison A Bertuch

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Genetic influences on haematopoiesis.Nature reviews. Genetics · 2026
    Review
  4. Review
  5. Review
  6. Clonal Signatures of Telomere Biology Disorders.Current hematologic malignancy reports · 2026
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Telomere biology disorders.NPJ genomic medicine · 2021
    Review
  15. Article
  16. Article
  17. CD8Journal of clinical laboratory analysis · 2020
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Lois M DodsonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.ORCID 0000-0002-3126-8873
Alessandro BaldanDepartment of Pediatrics, Hematology/Oncology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas.
Mikael NissbeckDepartment of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Sethu M R GunjaDepartment of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Penelope E BonnenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.ORCID 0000-0001-5581-5301
Geraldine AubertRepeat Diagnostics Inc., North Vancouver, British Columbia, Canada.
Sherri BirchanskyDepartment of Radiology, Baylor College of Medicine and Texas Children's Hospital, Houston, Texas.
Anders VirtanenDepartment of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Alison A BertuchDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.ORCID 0000-0003-1864-8502
Baylor College of Medicine · USUppsala University · SECollege of Veterinarians of British Columbia · CA

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007330 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI PLON, SHARON E. · 1985 to 2019
$15.6M
Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
Personalized Functional Genomics for Mitochondrial Encephalopathy Gene DiscoveryR01NS083726 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI BONNEN, PENELOPE E · 2014 to 2025
$6.1M
Molecular Genetics of the Telomere Biology DisordersR01HL131744 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI BERTUCH, ALISON A, HOCKEMEYER, DIRK · 2016 to 2025
$4.5M
TIN2L phosphorylation and dyskeratosis congenita pathogenic variants in telomere maintenanceF31HL142185 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI DODSON, LOIS MELISSA · 2018 to 2020
$101k
American Society of Hematology Bridge AwardLinnaeus Support from the Swedish Research Council to the Uppsala RNA Research CentreNHLBI NIH HHS F31 HL142185NHLBI NIH HHS R01 HL131744NHLBI NIH HHS R01HL131744NIDDK NIH HHS T32 DK060445NIDDK NIH HHS T32DK060445NIGMS NIH HHS T32 GM007330NIGMS NIH HHS T32GM007330NINDS NIH HHS R01NS08372NINDS NIH HHS R01 NS083726The Cullen Foundation
6 · The paper itself

Abstract

PARN encodes poly(A)-specific ribonuclease. Biallelic and monoallelic PARN variants are associated with Hoyeraal-Hreidarsson syndrome/dyskeratosis congenita and idiopathic pulmonary fibrosis (IPF), respectively. The molecular features associated with incomplete penetrance of PARN-associated IPF have not been described. We report a family with a rare missense, p.Y91C, and a novel insertion, p.(I274*), PARN variant. We found PARN p.Y91C had reduced deadenylase activity and the p.(I274*) transcript was depleted. Detailed analysis of the consequences of these variants revealed that, while PARN protein was lowest in the severely affected biallelic child who had the shortest telomeres, it was also reduced in his mother with the p.(I274*) variant but telomeres at the 50th percentile. Increased adenylation of telomerase RNA, human telomerase RNA, and certain small nucleolar RNAs, and impaired ribosomal RNA maturation were observed in cells derived from the severely affected biallelic carrier, but not in the other, less affected biallelic carrier, who had less severely shortened telomeres, nor in the monoallelic carriers who were unaffected and had telomeres ranging from the 1st to the 50th percentiles. We identified hsa-miR-202-5p as a potential negative regulator of PARN. We propose one or more genetic modifiers influence the impact of PARN variants on its targets and this underlies incomplete penetrance of PARN-associated disease.

Indexed as

Mutagenesis, InsertionalMutation, MissenseAdolescentCell LineChild, PreschoolDown-RegulationDyskeratosis CongenitaExoribonucleasesFemaleFetal Growth RetardationHumansIntellectual DisabilityMaleMicrocephalyMicroRNAsPedigreeExoribonucleasesMicroRNAsMIRN202 microRNA, humanidiopathic pulmonary fibrosisincomplete penetranceMIR202PARNpoly(A)-specific ribonucleasetelomere biology disorder

Identifiers

PMID31448843
PMCPMC6874886
OpenAlexW2971128744

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.