Evidence map›Paper›PMID 31447830›Full record

ArticleFrontiers in immunology2019

Age-Based Dynamics of a Stable Circulating Cd8 T Cell Repertoire Component.

Elena N Naumova, Maryam B Yassai, Wendy Demos, Erica Reed, Melissa Unruh, Dipica Haribhai, Calvin B Williams, Yuri N Naumov, Jack Gorski

Abstract read
In one paragraph

Article in Frontiers in immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elena N NaumovaFriedman School of Nutrition Science and Policy, Tufts University, Boston, MA, United States.
Maryam B YassaiVersiti Wisconsin, Blood Research Institute, Milwaukee, WI, United States.
Wendy DemosVersiti Wisconsin, Blood Research Institute, Milwaukee, WI, United States.
Erica ReedVersiti Wisconsin, Blood Research Institute, Milwaukee, WI, United States.
Melissa UnruhVersiti Wisconsin, Blood Research Institute, Milwaukee, WI, United States.
Dipica HaribhaiDepartment of Pediatrics, Medical College of Wisconsin, Milwaukee, WI, United States.
Calvin B WilliamsDepartment of Pediatrics, Medical College of Wisconsin, Milwaukee, WI, United States.
Yuri N NaumovUniversity of Massachusetts Medical School, Worcester, MA, United States.
Jack GorskiVersiti Wisconsin, Blood Research Institute, Milwaukee, WI, United States.

Funding

Viral Vector CoreU19AI062627 · NIAID · VERSITI WISCONSIN, INC. · PI GORSKI, JACK A · 2004 to 2008
$11.6M
Immune Function and Biodefense in Children, Elderly, and the ImmunocrompromisedN01AI50032 · NIAID · VERSITI WISCONSIN, INC. · PI GORSKI, JACK · 2007 to 2010
$9.0M
IMMUNE FUNCTION AND BIODEFENSE IN CHILDREN. ELDERLY AND IMMUNOCOMPROMI-266050032N01AI050032 · NIAID · BLOODCENTER OF WISCONSIN. INC · PI GORSKI, JACK · 2006 to 2006
–
NIAID NIH HHS N01 AI050032NIAID NIH HHS N01AI50032NIAID NIH HHS U19 AI062627
6 · The paper itself

Abstract

T-cell memory to pathogens can be envisioned as a receptor-based imprint of the pathogenic environment on the naïve repertoire of clonotypes. Recurrent exposures to a pathogen inform and reinforce memory, leading to a mature state. The complexity and temporal stability of this system in man is only beginning to be adequately described. We have been using a rank-frequency approach for quantitative analysis of CD8 T cell repertoires. Rank acts as a proxy for previous expansion, and rank-frequency, the number of clonotypes at a particular rank, as a proxy for abundance, with the relation of the two estimating the diversity of the system. Previous analyses of circulating antigen-experienced cytotoxic CD8 T-cell repertoires from adults have shown a complex two-component clonotype distribution. Here we show this is also the case for circulating CD8 T cells expressing the BV19 receptor chain from five adult subjects. When the repertoire characteristic of clonotype stability is added to the analysis, an inverse correlation between clonotype rank frequency and stability is observed. Clonotypes making up the second distributional component are stable; indicating that the circulation can be a depot of selected clonotypes. Temporal repertoire dynamics was further examined for influenza-specific T cells from children, middle-aged, and older adults. Taken together, these analyses describe a dynamic process of system development and aging, with increasing distributional complexity, leading to a stable circulating component, followed by loss of both complexity and stability.

Indexed as

AdolescentAdultAgedAged, 80 and overAge FactorsCD8-Positive T-LymphocytesChildClone CellsComplementarity Determining RegionsHumansImmunologic MemoryMiddle AgedReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betaCD8 receptorComplementarity Determining RegionsReceptors, Antigen, T-CellReceptors, Antigen, T-Cell, alpha-betacirculation as depotcomputational immunologyhuman CD8 T cellsrepertoire maturationsenescence

Identifiers

PMID31447830
PMCPMC6691812

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.