Evidence map›Paper›PMID 31444279›Full record

ArticleBioscience reports2019

Bioinformatics analysis of circulating miRNAs related to cancer following spinal cord injury.

Elisangela C P Lopes, Layde R Paim, José R Matos-Souza, Décio R Calegari, José I Gorla, Alberto Cliquet, Carmen S P Lima, John F McDonald, Wilson Nadruz, Roberto Schreiber

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Elisangela C P LopesDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
Layde R PaimDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
José R Matos-SouzaDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
Décio R CalegariSchool of Physical Education, University of Maringá, Maringá, PR, Brazil.
José I GorlaSchool of Physical Education, State University of Campinas, Campinas, SP, Brazil.
Alberto CliquetDepartment of Orthopedics, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
Carmen S P LimaDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
John F McDonaldSchool of Biology, Petit Institute of Bioengineering and BioSciences, Georgia Institute of Technology, Atlanta, GA, U.S.A.
Wilson NadruzDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil.
Roberto SchreiberDepartment of Internal Medicine, State University of Campinas Faculty of Medical Sciences, Campinas, SP, Brazil robertos@fcm.unicamp.br.ORCID 0000-0002-8930-7556
Universidade Estadual de Campinas (UNICAMP) · BRGeorgia Institute of Technology · USUniversidade de São Paulo · BRUniversidade Estadual de Maringá · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients with spinal cord injury (SCI) have an increased risk of developing esophageal, bladder and hematologic malignancies compared with the normal population. In the present study, we aimed to identify, through in silico analysis, miRNAs and their target genes related to the three most frequent types of cancer in individuals with SCI. In a previous study, we reported a pattern of expression of miRNAs in 17 sedentary SCI males compared with 22 healthy able-bodied males by TaqMan OpenArray. This list of miRNAs deregulated in SCI patients was uploaded to miRWALK2.0 to predict the target genes and pathways of selected miRNAs. We used Cytoscape software to construct the network displaying the miRNAs and their gene targets. Among the down-regulated miRNAs in SCI, 21, 19 and 20 miRNAs were potentially associated with hematological, bladder and esophageal cancer, respectively, and three target genes (

Indexed as

Computational BiologyAdultCell-Free Nucleic AcidsEsophageal NeoplasmsGene Expression Regulation, NeoplasticHematologic NeoplasmsHumansMaleMicroRNAsSedentary BehaviorSpinal Cord InjuriesUrinary Bladder NeoplasmsCell-Free Nucleic AcidsMicroRNAscancermiRNAsSpinal cord injury

Identifiers

PMID31444279
PMCPMC6753324
OpenAlexW2969523961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.