Evidence map›Paper›PMID 31442404›Full record

ArticleCell2019

Ketone Body Signaling Mediates Intestinal Stem Cell Homeostasis and Adaptation to Diet.

Chia-Wei Cheng, Moshe Biton, Adam L Haber, Nuray Gunduz, George Eng, Liam T Gaynor, Surya Tripathi, Gizem Calibasi-Kocal, Steffen Rickelt, Vincent L Butty and 20 more

Open access · greenAbstract read
In one paragraph

Article in Cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 227 papers.

0numbers the graph read from it
0cells of the map it votes in
227citing papers in PubMed
19.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

227 citing papers in PubMed, 368 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Regional organization of nutrient absorption across the small intestine.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
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  9. Article
  10. Article
  11. Article
  12. Article
  13. Ketone Body Supplementation Exerts Renoprotective Effects Against Adenine-Induced Kidney Injury via OXCT1-Mediated Ketolysis in Mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Diet-induced chromatin states influence intestinal stem cell memory.bioRxiv : the preprint server for biology · 2026
    Article
  20. Article

167 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 11 institutions in 3 countries.

Chia-Wei ChengKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Moshe BitonDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA 02114, USA; Klarman Cell Observatory, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.
Adam L HaberKlarman Cell Observatory, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.
Nuray GunduzKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Institute of Materials Science and Nanotechnology, National Nanotechnology Research Center (UNAM), Bilkent University, 06800 Ankara, Turkey.
George EngKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Department of Pathology, Massachusetts General Hospital Boston and Harvard Medical School, Boston, MA 02114, USA.
Liam T GaynorDana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA 02215, USA.
Surya TripathiKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Gizem Calibasi-KocalKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Dokuz Eylul University, Institute of Oncology, Department of Translational Oncology, Izmir, Turkey.
Steffen RickeltKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Vincent L ButtyBioMicro Center at MIT, Department of Biology, MIT, Cambridge, MA 02139, USA.
Marta Moreno-SerranoKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Ameena M IqbalKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Khristian E Bauer-RoweKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA.
Shinya ImadaKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Department of Gastroenterological and Transplant Surgery, Graduate School of Biomedical and Health Sciences, Hiroshima University, 1-2-3 Kasumi, Minami-ku, Hiroshima 734-8551, Japan.
Mehmet Sefa UlutasKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Department of Biology, Siirt University, Science and Arts Faculty, 56100 Siirt, Turkey.
Constantine MylonasDepartment of Biology, MIT, Cambridge, MA 02139, USA.
Mark T WharyDivision of Comparative Medicine, Department of Biological Engineering, MIT, Cambridge, MA 02139, USA.
Stuart S LevineBioMicro Center at MIT, Department of Biology, MIT, Cambridge, MA 02139, USA.
Yasemin BasbinarDokuz Eylul University, Institute of Oncology, Department of Translational Oncology, Izmir, Turkey.
Richard O HynesKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Department of Biology, MIT, Cambridge, MA 02139, USA.
Mari Mino-KenudsonDepartment of Pathology, Massachusetts General Hospital Boston and Harvard Medical School, Boston, MA 02114, USA.
Vikram DeshpandeDepartment of Pathology, Massachusetts General Hospital Boston and Harvard Medical School, Boston, MA 02114, USA.
Laurie A BoyerDepartment of Biology, MIT, Cambridge, MA 02139, USA.
James G FoxDivision of Comparative Medicine, Department of Biological Engineering, MIT, Cambridge, MA 02139, USA.
Christopher TerranovaGenomic Medicine Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Kunal RaiGenomic Medicine Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Helen Piwnica-WormsDepartment of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Maria M MihaylovaDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH 43210 USA.
Aviv RegevKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Klarman Cell Observatory, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Howard Hughes Medical Institute, Department of Biology, MIT, Cambridge, MA 02139, USA.
Ömer H YilmazKoch Institute for Integrative Cancer Research at MIT, Cambridge, MA 02139, USA; Department of Biology, MIT, Cambridge, MA 02139, USA; Department of Pathology, Massachusetts General Hospital Boston and Harvard Medical School, Boston, MA 02114, USA; Klarman Cell Observatory, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA. Electronic address: ohyilmaz@mit.edu.
Allen Institute · USKoch Institute for Integrative Cancer Research At MITIIT@MIT · USBroad Institute · USThe University of Texas MD Anderson Cancer Center · USDokuz Eylül University · TRMassachusetts General Hospital · USDana-Farber Cancer Institute · USHarvard University · USHoward Hughes Medical Institute · USThe Ohio State University · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Ramnik J Xavier · 1991 to 2026
$35.3M
MOLECULAR IMMUNOLOGY AND TUMOR BIOLOGYT32CA009216 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI David Michael Langenau · 1985 to 2026
$10.6M
Understanding and Improving Platinum Anticancer DrugsR01CA034992 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YILMAZ, OMER · 1985 to 2018
$6.8M
Project 2U54CA224068 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI CORCORAN, RYAN BRUCE, FLAHERTY, KEITH T · 2017 to 2021
$6.3M
The Extracellular Matrix in Tumor Progression and MetastasisU54CA163109 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WEINBERG, ROBERT A · 2011 to 2015
$3.7M
Fasting Protects Small Intestinal Stem Cells from Lethal DNA Damage: Mechanistic Insight and Preclinical TranslationR01CA207236 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI PIWNICA-WORMS, HELEN M · 2017 to 2021
$2.4M
Dietary control of stem cells in physiology and cancerR01CA211184 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YILMAZ, OMER · 2017 to 2021
$2.0M
Understanding the Mechanisms of Age-Dependent Decline of Intestinal Stem Cell FunctionR00AG054760 · NIA · OHIO STATE UNIVERSITY · PI MIHAYLOVA, MARIA M. · 2018 to 2020
$747k
Regulation of the Intestinal Stem Cell Niche in AgingR00AG045144 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YILMAZ, OMER · 2014 to 2016
$740k
Elucidating the role of fasting in intestinal stemness and tissue regenerationR00DK123407 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHENG, CHIA-WEI · 2021 to 2023
$727k
Understanding the Mechanisms of Age-Dependent Decline of Intestinal Stem Cell FunctionK99AG054760 · NIA · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI MIHAYLOVA, MARIA M. · 2017 to 2018
$224k
Elucidating the role of fasting in intestinal stemness and tissue regenerationK99DK123407 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHENG, CHIA-WEI · 2019 to 2020
$182k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA034992NCI NIH HHS R01 CA207236NCI NIH HHS R01 CA211184NCI NIH HHS T32 CA009216NCI NIH HHS U54 CA163109NCI NIH HHS U54 CA224068NIA NIH HHS K99 AG054760NIA NIH HHS R00 AG045144NIA NIH HHS R00 AG054760NIDDK NIH HHS K99 DK123407NIDDK NIH HHS P30 DK043351NIDDK NIH HHS R00 DK123407
6 · The paper itself

Abstract

Little is known about how metabolites couple tissue-specific stem cell function with physiology. Here we show that, in the mammalian small intestine, the expression of Hmgcs2 (3-hydroxy-3-methylglutaryl-CoA synthetase 2), the gene encoding the rate-limiting enzyme in the production of ketone bodies, including beta-hydroxybutyrate (βOHB), distinguishes self-renewing Lgr5

Indexed as

Diet, High-Fat3-Hydroxybutyric AcidAged, 80 and overAnimalsCell DifferentiationCell Self RenewalFemaleHistone Deacetylase InhibitorsHumansHydroxymethylglutaryl-CoA SynthaseIntestinesKetone BodiesMaleMiceMice, KnockoutReceptors, G-Protein-Coupled3-Hydroxybutyric AcidHistone Deacetylase InhibitorsHMGCS2 protein, mouseHydroxymethylglutaryl-CoA SynthaseKetone BodiesLgr5 protein, mouseReceptors, G-Protein-CoupledReceptors, Notchbeta-hydroxybutyrateHDACHmgcs2Intestinal stem cellketogenic dietketone bodiesNotch

Identifiers

PMID31442404
PMCPMC6732196
OpenAlexW2969784858

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.