Evidence map›Paper›PMID 31440325›Full record

ArticleThe World Allergy Organization journal2019

Western oropharyngeal and gut microbial profiles are associated with allergic conditions in Chinese immigrant children.

Jing Guo, Quanjun Lv, Amir Ariff, Xiaoping Zhang, Christopher S Peacock, Yong Song, Xiajie Wen, Aarti Saiganesh, Phillip E Melton, Gary A Dykes and 4 more

Open access · goldAbstract read
In one paragraph

Article in The World Allergy Organization journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

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  11. Linking the westernised oropharyngeal microbiome to the immune response in Chinese immigrants.Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Jing GuoSchool of Public Health, Curtin University of Technology, Perth, WA, Australia.
Quanjun LvDepartment of Nutrition and Food Hygiene, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China.
Amir AriffCentre for Genetic Origins of Health and Disease, Faculty of Health Sciences, Curtin University of Technology, Faculty of Health and Medical Sciences, The University of Western Australia, Royal Perth Hospital Medical Research Foundation, Perth, WA, Australia.
Xiaoping ZhangChina National Bamboo Research Centre, Key Laboratory of Resources and Utilization of Bamboo of State Forestry Administration, Hangzhou, Zhejiang, China.
Christopher S PeacockMarshall Centre for Infectious Disease, School of Pathology and Laboratory Medicine, The University of Western Australia, Perth, WA, Australia.
Yong SongSchool of Public Health, Curtin University of Technology, Perth, WA, Australia.
Xiajie WenDepartment of Nutrition and Food Hygiene, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China.
Aarti SaiganeshTelethon Kids Institute, The University of Western Australia, Perth, WA, Australia.
Phillip E MeltonCentre for Genetic Origins of Health and Disease, Faculty of Health Sciences, Curtin University of Technology, Faculty of Health and Medical Sciences, The University of Western Australia, Royal Perth Hospital Medical Research Foundation, Perth, WA, Australia.
Gary A DykesSchool of Public Health, Curtin University of Technology, Perth, WA, Australia.
Eric K MosesCentre for Genetic Origins of Health and Disease, Faculty of Health Sciences, Curtin University of Technology, Faculty of Health and Medical Sciences, The University of Western Australia, Royal Perth Hospital Medical Research Foundation, Perth, WA, Australia.
Peter N LE SouëfDivision of Cardiovascular and Respiratory Sciences, The University of Western Australia, Perth, WA, Australia.
Fengmin LuDepartment of Microbiology & Infectious Disease Centre, School of Basic Medical Sciences, Peking University Health Science Centre, Beijing, China.
Guicheng ZhangSchool of Public Health, Curtin University of Technology, Perth, WA, Australia.
The University of Western Australia · AUThe Kids Research Institute Australia · AUZhengzhou University · CNChina National Bamboo Research Center · CNCurtin University · AUPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe allergy epidemic resulting from western environment/lifestyles is potentially due to modifications of the human microbiome. Therefore, it is of interest to study immigrants living in a western environment as well as their counterparts in the country of origin to understand differences in their microbiomes and health status.

methodsWe investigated 58 Australian Chinese (AC) children from Perth, Western Australia as well as 63 Chinese-born Chinese (CC) children from a city in China. Oropharyngeal (OP) and fecal samples were collected. To assess the microbiomes, 16s ribosomal RNA (rRNA) sequencing for variable regions V3 and V4 was used. Skin prick tests (SPT) were performed to measure the children's atopic status. Information on food allergy and wheezing were acquired from a questionnaire.

resultsAC children had more allergic conditions than CC children. The alpha diversity (mean species diversity) of both OP and gut microbiome was lower in AC children compared to CC children for richness estimate (Chao1), while diversity evenness (Shannon index) was higher. The beta diversity (community similarity) displayed a distinct separation of the OP and gut microbiota between AC and CC children. An apparent difference in microbial abundance was observed for many bacteria. In AC children, we sought to establish consistent trends in bacterial relative abundance that are either higher or lower in AC versus CC children and higher or lower in children with allergy versus those without allergy. The majority of OP taxa showed a consistent trend while the majority of fecal taxa showed a contrasting trend.

conclusionDistinct differences in microbiome compositions were found in both oropharyngeal and fecal samples of AC and CC children. The association of the OP microbiome with allergic condition is different from that of the gut microbiome in AC children. The microbiome profiles are changed by the western environment/lifestyle and are associated with allergies in Chinese immigrant children in Australia.

Indexed as

AC, Australian ChineseAllergyAtopyBMI, body mass indexCC, China-Born ChineseFDR, false discovery rateImmigrationKEGG, Kyoto Encyclopaedia of Genes and GenomesLDA, The linear discriminant analysisLEfSe, The linear discriminant analysis effect sizeMicrobiomeOP, oropharyngealPICRUSt, Phylogenetic Investigation of Communities by Reconstruction of Unobserved StatesrRNA, ribosomal RNASPT, skin prick testWestern environment

Identifiers

PMID31440325
PMCPMC6699559
OpenAlexW2968012609

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.