Evidence map›Paper›PMID 31440130›Full record

ArticleFrontiers in neuroscience2019

The Chromatin Environment Around Interneuron Genes in Oligodendrocyte Precursor Cells and Their Potential for Interneuron Reprograming.

Linda L Boshans, Daniel C Factor, Vijender Singh, Jia Liu, Chuntao Zhao, Ion Mandoiu, Q Richard Lu, Patrizia Casaccia, Paul J Tesar, Akiko Nishiyama

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroscience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The epigenetic landscape of oligodendrocyte lineage cells.Annals of the New York Academy of Sciences · 2023
    Review
  7. Article
  8. Life-long oligodendrocyte development and plasticity.Seminars in cell & developmental biology · 2021
    Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Linda L BoshansDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, CT, United States.
Daniel C FactorDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, United States.
Vijender SinghComputational Biology Core, University of Connecticut, Storrs, CT, United States.
Jia LiuAdvanced Science Research Center at the Graduate Center, Neuroscience Initiative, The City University of New York, New York, NY, United States.
Chuntao ZhaoDepartment of Pediatrics, University of Cincinnati, Cincinnati, OH, United States.
Ion MandoiuDepartment of Computer Science and Engineering, University of Connecticut, Storrs, CT, United States.
Q Richard LuDepartment of Pediatrics, University of Cincinnati, Cincinnati, OH, United States.
Patrizia CasacciaAdvanced Science Research Center at the Graduate Center, Neuroscience Initiative, The City University of New York, New York, NY, United States.
Paul J TesarDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, United States.
Akiko NishiyamaDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, CT, United States.
University of Connecticut · USCase Western Reserve University · USUniversity of Cincinnati · USCity University of New York · USThe Graduate Center, CUNY · US

Funding

Inflammation and NG2 Cell DifferentiationR01NS073425 · NINDS · UNIVERSITY OF CONNECTICUT STORRS · PI NISHIYAMA, AKIKO · 2011 to 2021
$3.3M
Heterogeneity of NG2 Glial CellsR01NS074870 · NINDS · UNIVERSITY OF CONNECTICUT STORRS · PI NISHIYAMA, AKIKO · 2012 to 2016
$1.7M
NINDS NIH HHS R01 NS073425NINDS NIH HHS R01 NS074870
6 · The paper itself

Abstract

Oligodendrocyte precursor cells (OPCs), also known as NG2 glia, arise from neural progenitor cells in the embryonic ganglionic eminences that also generate inhibitory neurons. They are ubiquitously distributed in the central nervous system, remain proliferative through life, and generate oligodendrocytes in both gray and white matter. OPCs exhibit some lineage plasticity, and attempts have been made to reprogram them into neurons, with varying degrees of success. However, little is known about how epigenetic mechanisms affect the ability of OPCs to undergo fate switch and whether OPCs have a unique chromatin environment around neuronal genes that might contribute to their lineage plasticity. Our bioinformatic analysis of histone posttranslational modifications at interneuron genes in OPCs revealed that OPCs had significantly fewer bivalent and repressive histone marks at interneuron genes compared to astrocytes or fibroblasts. Conversely, OPCs had a greater degree of deposition of active histone modifications at bivalently marked interneuron genes than other cell types, and this was correlated with higher expression levels of these genes in OPCs. Furthermore, a significantly higher proportion of interneuron genes in OPCs than in other cell types lacked the histone posttranslational modifications examined. These genes had a moderately high level of expression, suggesting that the "no mark" interneuron genes could be in a transcriptionally "poised" or "transitional" state. Thus, our findings suggest that OPCs have a unique histone code at their interneuron genes that may obviate the need for erasure of repressive marks during their fate switch to inhibitory neurons.

Indexed as

chromatinhistone post-translational modificationinhibitory neuronNG2oligodendrocytereprograming

Identifiers

PMID31440130
PMCPMC6694778
OpenAlexW2963957103

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.