Evidence map›Paper›PMID 31439802›Full record

ArticleThe Plant cell2019

Genome-Wide Reinforcement of DNA Methylation Occurs during Somatic Embryogenesis in Soybean.

Lexiang Ji, Sandra M Mathioni, Sarah Johnson, Donna Tucker, Adam J Bewick, Kyung Do Kim, Josquin Daron, R Keith Slotkin, Scott A Jackson, Wayne A Parrott and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Article
  3. DNA methylation in plant heterosis: mechanisms and prospects.Functional & integrative genomics · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
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  13. Article
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  15. Review
  16. Involvement of 5mC DNA demethylationForestry research · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Lexiang JiInstitute of Bioinformatics, University of Georgia, Athens, Georgia 30602.ORCID 0000-0003-2670-8413
Sandra M MathioniDonald Danforth Plant Science Center, St. Louis, Missouri 63132.ORCID 0000-0002-8853-4108
Sarah JohnsonInstitute for Plant Breeding Genetics and Genomics, University of Georgia, Athens, Georgia 30602.ORCID 0000-0002-5422-9180
Donna TuckerInstitute for Plant Breeding Genetics and Genomics, University of Georgia, Athens, Georgia 30602.ORCID 0000-0001-6771-6386
Adam J BewickDepartment of Genetics, University of Georgia, Athens, Georgia 30602.ORCID 0000-0002-4609-7966
Kyung Do KimCenter for Applied Genetic Technologies, University of Georgia, Athens, Georgia 30602.ORCID 0000-0001-5296-2349
Josquin DaronDepartment of Molecular Genetics, Ohio State University, Columbus, Ohio 43210.ORCID 0000-0003-3914-5998
R Keith SlotkinDonald Danforth Plant Science Center, St. Louis, Missouri 63132.ORCID 0000-0001-9582-3533
Scott A JacksonCenter for Applied Genetic Technologies, University of Georgia, Athens, Georgia 30602.ORCID 0000-0002-3172-1607
Wayne A ParrottInstitute for Plant Breeding Genetics and Genomics, University of Georgia, Athens, Georgia 30602.ORCID 0000-0001-7847-1134
Blake C MeyersDonald Danforth Plant Science Center, St. Louis, Missouri 63132 bmeyers@danforthcenter.org schmitz@uga.edu.ORCID 0000-0003-3436-6097
Robert J SchmitzDepartment of Genetics, University of Georgia, Athens, Georgia 30602 bmeyers@danforthcenter.org schmitz@uga.edu.ORCID 0000-0001-7538-6663
University of Georgia · USDonald Danforth Plant Science Center · USThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatic embryogenesis is an important tissue culture technique that sometimes leads to phenotypic variation via genetic and/or epigenetic changes. To understand the genomic and epigenomic impacts of somatic embryogenesis, we characterized soybean (

Indexed as

Cells, CulturedDNA MethylationEpigenesis, GeneticEpigenomeGene Expression Regulation, PlantGene OntologyGene SilencingGenome, PlantGlycine maxHigh-Throughput Nucleotide SequencingPhylogenyPlant Somatic Embryogenesis TechniquesRNA-SeqSeeds

Identifiers

PMID31439802
PMCPMC6790092
OpenAlexW2969891096

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.