ArticleGenome research2019
Large-scale genome analysis of bovine commensal
Open access · bronzeAbstract readComparative Study
In one paragraph
Article in Genome research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
37 citing papers in PubMed, 57 citations in OpenAlex.
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- Genomic analysis of extended-spectrum beta-lactamase-producingFrontiers in veterinary science · 2025Article
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- Comparative genomics of Shiga toxin-producingFrontiers in veterinary science · 2025Article
- Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024Article
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- Detection and characterization of potentially hybrid enteroaggregative Escherichia coli (EAEC) strains isolated from urinary tract infection.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024Article
- Comparative Genomic Analyses of Escherichia coli from a Meat Processing Environment in Relation to Their Biofilm Formation and Persistence.Microbiology spectrum · 2023Article
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- Genomic diversity of non-diarrheagenic fecal Escherichia coli from children in sub-Saharan Africa and south Asia and their relatedness to diarrheagenic E. coli.Nature communications · 2023Article
- The Diversity ofMicroorganisms · 2023Review
- Genomic analysis of Escherichia coli circulating in the Brazilian poultry sector.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022Article
- Enteropathogenic Escherichia coli (EPEC) expressing a non-functional bundle-forming pili (BFP) also leads to increased growth failure and intestinal inflammation in C57BL/6 mice.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022Article
- Multidrug-Resistant High-RiskAntibiotics (Basel, Switzerland) · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
22 authors at 10 institutions in 4 countries.
Yoko ArimizuDepartment of Bacteriology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Yumi KirinoLaboratory of Veterinary Radiology, Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan.
Mitsuhiko P SatoDepartment of Bacteriology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Koichi UnoJapan Microbiological Laboratory, Sendai, Miyagi 983-0034, Japan.
Toshio SatoJapan Microbiological Laboratory, Sendai, Miyagi 983-0034, Japan.
Yasuhiro GotohDepartment of Bacteriology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Frédéric AuvrayIRSD, Université de Toulouse, INSERM, INRA, ENVT, UPS, 31300 Toulouse, France.
Hubert BrugereIRSD, Université de Toulouse, INSERM, INRA, ENVT, UPS, 31300 Toulouse, France.
Eric OswaldIRSD, Université de Toulouse, INSERM, INRA, ENVT, UPS, 31300 Toulouse, France.
Jacques G MainilBacteriology, Department of Infectious Diseases, Faculty of Veterinary Medicine and Institute for Fundamental and Applied Research in Animal Health (FARAH), University of Liège, 4000 Liège, Belgium.
Kelly S AnklamDepartment of Medical Sciences, School of Veterinary Medicine, University of Wisconsin, Madison, Wisconsin 53705, USA.
Dörte DöpferDepartment of Medical Sciences, School of Veterinary Medicine, University of Wisconsin, Madison, Wisconsin 53705, USA.
Shuji YoshinoDepartment of Microbiology, Miyazaki Prefectural Institute for Public Health and Environment, Miyazaki 889-2155, Japan.
Tadasuke OokaDepartment of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima 890-8520, Japan.
Yasuhiro TanizawaCenter for Information Biology, National Institute of Genetics, Research Organization of Information and Systems, Mishima, Shizuoka 411-8540, Japan.
Yasukazu NakamuraCenter for Information Biology, National Institute of Genetics, Research Organization of Information and Systems, Mishima, Shizuoka 411-8540, Japan.
Atsushi IguchiDepartment of Animal and Grassland Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan.
Tomoko Morita-IshiharaDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo 162-8640, Japan.
Makoto OhnishiDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo 162-8640, Japan.
Koichi AkashiDepartment of Medicine and Biosystemic Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Tetsuya HayashiDepartment of Bacteriology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Yoshitoshi OguraDepartment of Bacteriology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
Kyushu University · JPUniversité Toulouse III - Paul Sabatier · FRMiyagi University · JPNational Institute of Genetics · JPNational Institute of Infectious Diseases · JPUniversity of Miyazaki · JPUniversity of Wisconsin–Madison · USKagoshima University · JPMiyazaki Prefectural Hospital · JPUniversity of Liège · BE
Funding
No grant is acknowledged in the PubMed record.
Abstract
How pathogens evolve their virulence to humans in nature is a scientific issue of great medical and biological importance. Shiga toxin (Stx)-producing
Indexed as
AnimalsCattleEnteropathogenic Escherichia coliEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsEvolution, MolecularGene Regulatory NetworksGenome, BacterialHumansPhylogenyShiga-Toxigenic Escherichia coliSymbiosisVirulence FactorsWhole Genome SequencingEscherichia coli ProteinsVirulence Factors
Identifiers
What OpenQuestion holds
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LicenceCC BY-NC
Read underepoch 390
Registered trials
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.