Evidence map›Paper›PMID 31437931›Full record

ArticleStudies in health technology and informatics2019

Evaluating the Impact of Data Representation on EHR-Based Analytic Tasks.

Wonsuk Oh, Michael S Steinbach, M Regina Castro, Kevin A Peterson, Vipin Kumar, Pedro J Caraballo, Gyorgy J Simona

Abstract read
In one paragraph

Article in Studies in health technology and informatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Different Data Mining Approaches Based Medical Text Data.Journal of healthcare engineering · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Wonsuk OhInstitute for Health Informatics, University of Minnesota, Minneapolis, MN, USA.
Michael S SteinbachDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA.
M Regina CastroDivision of Endocrinology, Diabetes, Metabolism and Nutrition, Mayo Clinic, Rochester, MN, USA.
Kevin A PetersonDepartment of Family Medicine and Community Health, University of Minnesota, Minneapolis, MN, USA.
Vipin KumarDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA.
Pedro J CaraballoDepartment of General Internal Medicine, Mayo Clinic, Rochester, MN, USA.
Gyorgy J SimonaDepartment of Medicine, University of Minnesota, Minneapolis, MN, USA.

Funding

Extracting Typical and Atypical Disease Progression Patterns from Multi-Site EHRR01LM011972 · NLM · UNIVERSITY OF MINNESOTA · PI SIMON, GYORGY · 2015 to 2018
$1.3M
NLM NIH HHS R01 LM011972
6 · The paper itself

Abstract

Different analytic techniques operate optimally with different types of data. As the use of EHR-based analytics expands to newer tasks, data will have to be transformed into different representations, so the tasks can be optimally solved. We classified representations into broad categories based on their characteristics, and proposed a new knowledge-driven representation for clinical data mining as well as trajectory mining, called Severity Encoding Variables (SEVs). Additionally, we studied which characteristics make representations most suitable for particular clinical analytics tasks including trajectory mining. Our evaluation shows that, for regression, most data representations performed similarly, with SEV achieving a slight (albeit statistically significant) advantage. For patients at high risk of diabetes, it outperformed the competing representation by (relative) 20%. For association mining, SEV achieved the highest performance. Its ability to constrain the search space of patterns through clinical knowledge was key to its success.

Indexed as

Data MiningElectronic Health RecordsData MiningData ScienceElectronic Health Records

Identifiers

PMID31437931
PMCPMC7666864

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.