Evidence map›Paper›PMID 31437150›Full record

ArticlePLoS genetics2019

Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation.

Qiaowei Pan, Romain Feron, Ayaka Yano, René Guyomard, Elodie Jouanno, Estelle Vigouroux, Ming Wen, Jean-Mickaël Busnel, Julien Bobe, Jean-Paul Concordet and 9 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
17.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 159 citations in OpenAlex.

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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 4 countries.

Qiaowei PanINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0002-8501-0405
Romain FeronINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0001-5893-6184
Ayaka YanoINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.
René GuyomardGABI, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.
Elodie JouannoINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.
Estelle VigourouxINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0002-4861-0348
Ming WenINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.
Jean-Mickaël BusnelFédération d'Ille-et-Vilaine pour la pêche et la protection du milieu aquatique (FDPPMA35), CS 26713, Rennes, France.
Julien BobeINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0002-9355-8227
Jean-Paul ConcordetINSERM U1154, CNRS UMR7196, MNHN, Muséum National d'Histoire Naturelle, France.
Hugues ParrinelloInstitut de Génomique Fonctionnelle, IGF, CNRS, INSERM, Université de Montpellier, Montpellier, France.
Laurent JournotInstitut de Génomique Fonctionnelle, IGF, CNRS, INSERM, Université de Montpellier, Montpellier, France.
Christophe KloppPlate-forme bio-informatique Genotoul, Mathématiques et Informatique Appliquées de Toulouse, INRA, Castanet Tolosan, France.ORCID 0000-0001-7126-5477
Jérôme LluchINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Céline RoquesINRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
John PostlethwaitInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0002-5476-2137
Manfred SchartlUniversity of Wuerzburg, Physiological Chemistry, Biocenter, Würzburg, Germany.ORCID 0000-0001-9882-5948
Amaury HerpinINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0002-0630-4027
Yann GuiguenINRA, UR1037 LPGP, Campus de Beaulieu, Rennes, France.ORCID 0000-0001-5464-6219
Laboratoire de Physiologie et Génomique des Poissons · FRCentre National de la Recherche Scientifique · FRAgroParisTech · FRÉcole Nationale Vétérinaire de Toulouse · FRStress Environnementaux et Biosurveillance des Milieux Aquatiques · FRUniversity of Oregon · USUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Teleost fishes, thanks to their rapid evolution of sex determination mechanisms, provide remarkable opportunities to study the formation of sex chromosomes and the mechanisms driving the birth of new master sex determining (MSD) genes. However, the evolutionary interplay between the sex chromosomes and the MSD genes they harbor is rather unexplored. We characterized a male-specific duplicate of the anti-Müllerian hormone (amh) as the MSD gene in Northern Pike (Esox lucius), using genomic and expression evidence as well as by loss-of-function and gain-of-function experiments. Using RAD-Sequencing from a family panel, we identified Linkage Group (LG) 24 as the sex chromosome and positioned the sex locus in its sub-telomeric region. Furthermore, we demonstrated that this MSD originated from an ancient duplication of the autosomal amh gene, which was subsequently translocated to LG24. Using sex-specific pooled genome sequencing and a new male genome sequence assembled using Nanopore long reads, we also characterized the differentiation of the X and Y chromosomes, revealing a small male-specific insertion containing the MSD gene and a limited region with reduced recombination. Our study reveals an unexpectedly low level of differentiation between a pair of sex chromosomes harboring an old MSD gene in a wild teleost fish population, and highlights both the pivotal role of genes from the amh pathway in sex determination, as well as the importance of gene duplication as a mechanism driving the turnover of sex chromosomes in this clade.

Indexed as

AnimalsAnimals, Genetically ModifiedAnti-Mullerian HormoneChromosome MappingEsocidaeFemaleGene DuplicationGene Knockdown TechniquesMalePhylogenySex ChromosomesSex Determination ProcessesSyntenyAnti-Mullerian Hormone

Identifiers

PMID31437150
PMCPMC6726246
OpenAlexW2969540879

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.