Evidence map›Paper›PMID 31436506›Full record

ArticleThe CRISPR journal2019

RNA-Guided Recombinase-Cas9 Fusion Targets Genomic DNA Deletion and Integration.

Kylie Standage-Beier, Nicholas Brookhouser, Parithi Balachandran, Qi Zhang, David A Brafman, Xiao Wang

Abstract read
In one paragraph

Article in The CRISPR journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kylie Standage-BeierSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.
Nicholas BrookhouserSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.
Parithi BalachandranSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.
Qi ZhangSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.
David A BrafmanSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.
Xiao WangSchool of Biological and Health Systems Engineering and University of Arizona College of Medicine-Phoenix, Phoenix, Arizona.

Funding

Forward engineering to understand gene regulatory network topologiesR01GM106081 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, XIAO · 2014 to 2018
$1.7M
Predictive Modeling of Pattern Formation Driven by Synthetic Gene NetworksR01GM131405 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI KUANG, YANG · 2018 to 2021
$1.5M
Generation and characterization of isogenic hiPSC lines with various APOE genotypesR21AG056706 · NIA · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI BRAFMAN, DAVID A · 2017 to 2018
$409k
NIA NIH HHS R21 AG056706NIGMS NIH HHS R01 GM106081NIGMS NIH HHS R01 GM131405
6 · The paper itself

Abstract

CRISPR-based technologies have become central to genome engineering. However, CRISPR-based editing strategies are dependent on the repair of DNA breaks via endogenous DNA repair mechanisms, which increases susceptibility to unwanted mutations. Here we complement Cas9 with a recombinase's functionality by fusing a hyperactive mutant resolvase from transposon Tn3, a member of serine recombinases, to a catalytically inactive Cas9, which we term integrase Cas9 (iCas9). We demonstrate iCas9 targets DNA deletion and integration. First, we validate iCas9's function in

Indexed as

CRISPR-Cas SystemsCRISPR-Associated Protein 9Gene EditingHEK293 CellsHumansRecombinant Fusion ProteinsSaccharomyces cerevisiaeTransposon ResolvasesCRISPR-Associated Protein 9Recombinant Fusion ProteinsTn3 resolvaseTransposon Resolvases

Identifiers

PMID31436506
PMCPMC6707420

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.