Evidence map›Paper›PMID 31434729›Full record

ArticleJournal of virology2019

Transcriptional Response of Ovine Lung to Infection with Jaagsiekte Sheep Retrovirus.

Anna Eleonora Karagianni, Deepali Vasoya, Jeanie Finlayson, Henny M Martineau, Ann R Wood, Chris Cousens, Mark P Dagleish, Mick Watson, David J Griffiths

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Anna Eleonora KaragianniMoredun Research Institute, Edinburgh, United Kingdom.
Deepali VasoyaRoslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom.
Jeanie FinlaysonMoredun Research Institute, Edinburgh, United Kingdom.
Henny M MartineauMoredun Research Institute, Edinburgh, United Kingdom.
Ann R WoodMoredun Research Institute, Edinburgh, United Kingdom.
Chris CousensMoredun Research Institute, Edinburgh, United Kingdom.
Mark P DagleishMoredun Research Institute, Edinburgh, United Kingdom.
Mick WatsonRoslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0003-4211-0358
David J GriffithsMoredun Research Institute, Edinburgh, United Kingdom david.griffiths@moredun.ac.uk.ORCID 0000-0001-9160-0770
Moredun Research Institute · GBRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J004235/1Biotechnology and Biological Sciences Research Council BB/J004243/1Biotechnology and Biological Sciences Research Council BB/L008505/1Biotechnology and Biological Sciences Research Council BB/L009129/1Biotechnology and Biological Sciences Research Council BB/P013732/1Biotechnology and Biological Sciences Research Council BB/P013740/1Biotechnology and Biological Sciences Research Council BB/P013759/1Biotechnology and Biological Sciences Research Council BBS/E/D/20002173Biotechnology and Biological Sciences Research Council BBS/E/D/20002174
6 · The paper itself

Abstract

Jaagsiekte sheep retrovirus (JSRV) is the etiologic agent of ovine pulmonary adenocarcinoma (OPA), a neoplastic lung disease of sheep. OPA is an important economic and welfare issue for sheep farmers and a valuable naturally occurring animal model for human lung adenocarcinoma. Here, we used RNA sequencing to study the transcriptional response of ovine lung tissue to infection by JSRV. We identified 1,971 ovine genes differentially expressed in JSRV-infected lung compared to noninfected lung, including many genes with roles in carcinogenesis and immunomodulation. The differential expression of selected genes was confirmed using immunohistochemistry and reverse transcription-quantitative PCR. A key finding was the activation of anterior gradient 2, yes-associated protein 1, and amphiregulin in OPA tumor cells, indicating a role for this oncogenic pathway in OPA. In addition, there was differential expression of genes related to innate immunity, including genes encoding cytokines, chemokines, and complement system proteins. In contrast, there was little evidence for the upregulation of genes involved in T-cell immunity. Many genes related to macrophage function were also differentially expressed, reflecting the increased abundance of these cells in OPA-affected lung tissue. Comparison of the genes differentially regulated in OPA with the transcriptional changes occurring in human lung cancer revealed important similarities and differences between OPA and human lung adenocarcinoma. This study provides valuable new information on the pathogenesis of OPA and strengthens the use of this naturally occurring animal model for human lung adenocarcinoma.

Indexed as

Adenocarcinoma of LungAnimalsGene Expression ProfilingGene Expression Regulation, NeoplasticHost-Pathogen InteractionsHumansJaagsiekte sheep retrovirusLungLung NeoplasmsPulmonary Adenomatosis, OvineSheepcancerjaagsiekteJSRVlung adenocarcinomalung infectionovine pulmonary adenocarcinomaRNA-Seqsheep

Identifiers

PMID31434729
PMCPMC6803282
OpenAlexW2969793069

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.