Evidence map›Paper›PMID 31434681›Full record

ArticleBlood advances2019

Clinical significance of DNA methylation in chronic lymphocytic leukemia patients: results from 3 UK clinical trials.

Tomasz K Wojdacz, Harindra E Amarasinghe, Latha Kadalayil, Alice Beattie, Jade Forster, Stuart J Blakemore, Helen Parker, Dean Bryant, Marta Larrayoz, Ruth Clifford and 17 more

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  11. Towards precision medicine in lymphoid malignancies.Journal of internal medicine · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Altered DNA Methylation Profiles inInternational journal of molecular sciences · 2021
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 13 institutions in 9 countries.

Tomasz K WojdaczCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Harindra E AmarasingheCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Latha KadalayilGenetic Epidemiology and Bioinformatics, Faculty of Medicine, and.ORCID 0000-0002-1553-9565
Alice BeattieCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Jade ForsterCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Stuart J BlakemoreCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Helen ParkerCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Dean BryantCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Marta LarrayozCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.
Ruth CliffordOxford National Institute for Health Research Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, United Kingdom.
Pauline RobbeOxford National Institute for Health Research Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-0691-1126
Zadie A DavisDepartment of Molecular Pathology, Royal Bournemouth Hospital, Bournemouth, United Kingdom.
Monica ElseDivision of Molecular Pathology, The Institute of Cancer Research, London, United Kingdom.
Dena R HowardLeeds Institute of Clinical Trials Research, University of Leeds, Leeds, United Kingdom.ORCID 0000-0003-3333-9783
Basile StamatopoulosUniversité Libre de Bruxelles, Laboratory of Clinical Cell Therapy, Jules Bordet Institute, Brussels, Belgium.
Andrew J SteeleCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.ORCID 0000-0003-0667-1596
Richard RosenquistDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Andrew CollinsGenetic Epidemiology and Bioinformatics, Faculty of Medicine, and.
Andrew R PettittDepartment of Molecular and Clinical Cancer Medicine, University of Liverpool, Liverpool, United Kingdom.
Peter HillmenLeeds Institute of Cancer and Pathology, University of Leeds, Leeds, United Kingdom.
Christoph PlassDivision of Epigenomics and Cancer Risk Factors, The German Cancer Research Center, Heidelberg, Germany; and.
Anna SchuhOxford National Institute for Health Research Biomedical Research Centre/Molecular Diagnostic Centre, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-3938-8490
Daniel CatovskyDivision of Molecular Pathology, The Institute of Cancer Research, London, United Kingdom.
David G OscierDepartment of Molecular Pathology, Royal Bournemouth Hospital, Bournemouth, United Kingdom.
Matthew J J Rose-ZerilliCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.ORCID 0000-0002-1064-5350
Christopher C OakesDivision of Hematology, Department of Internal Medicine, The Ohio State University, Columbus, OH.
Jonathan C StreffordCancer Genomics, Cancer Research UK Centre and Experimental Cancer Medicine Centre, Academic Unit of Cancer Sciences, University of Southampton, Southampton General Hospital, Southampton, United Kingdom.ORCID 0000-0002-0972-2881
Cancer Research UK · GBNational Institute for Health Research · GBInstitute of Cancer Research · GBInstitut thématique Génétique, génomique et bioinformatique · FRRoyal Bournemouth Hospital · GBUniversity of Leeds · GBAarhus University · DKGerman Cancer Research Center · DEKarolinska Institutet · SEThe Ohio State University · USUniversité Libre de Bruxelles · BEUniversity of Cologne · DEUniversity of Liverpool · GB

Funding

Cancer Research UK C24563/A15581Cancer Research UK C34999/A18087Department of Health 07/01/38
6 · The paper itself

Abstract

Chronic lymphocytic leukemia patients with mutated immunoglobulin heavy-chain genes (IGHV-M), particularly those lacking poor-risk genomic lesions, often respond well to chemoimmunotherapy (CIT). DNA methylation profiling can subdivide early-stage patients into naive B-cell-like CLL (n-CLL), memory B-cell-like CLL (m-CLL), and intermediate CLL (i-CLL), with differing times to first treatment and overall survival. However, whether DNA methylation can identify patients destined to respond favorably to CIT has not been ascertained. We classified treatment-naive patients (n = 605) from 3 UK chemo and CIT clinical trials into the 3 epigenetic subgroups, using pyrosequencing and microarray analysis, and performed expansive survival analysis. The n-CLL, i-CLL, and m-CLL signatures were found in 80% (n = 245/305), 17% (53/305), and 2% (7/305) of IGHV-unmutated (IGHV-U) cases, respectively, and in 9%, (19/216), 50% (108/216), and 41% (89/216) of IGHV-M cases, respectively. Multivariate Cox proportional analysis identified m-CLL as an independent prognostic factor for overall survival (hazard ratio [HR], 0.46; 95% confidence interval [CI], 0.24-0.87;

Indexed as

DNA MethylationGene Expression Regulation, LeukemicAdultAgedAged, 80 and overChromosome AberrationsComputational BiologyEpigenesis, GeneticEpigenomicsFemaleGene Expression ProfilingHumansImmunoglobulin Heavy ChainsLeukemia, Lymphocytic, Chronic, B-CellMaleMiddle AgedImmunoglobulin Heavy Chains

Identifiers

PMID31434681
PMCPMC6712529
OpenAlexW2969685297

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.