Evidence map›Paper›PMID 31434245›Full record

ArticleInternational journal of molecular sciences2019

Proteomic Phosphosite Analysis Identified Crucial NPM-ALK-Mediated NIPA Serine and Threonine Residues.

Anina Gengenbacher, Alina Müller-Rudorf, Teresa Poggio, Linda Gräßel, Veronica I Dumit, Stefanie Kreutmair, Lena J Lippert, Justus Duyster, Anna L Illert

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Anina GengenbacherDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Alina Müller-RudorfDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Teresa PoggioDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.ORCID 0000-0003-2560-8488
Linda GräßelDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Veronica I DumitCenter for Biological Systems Analysis (ZBSA), University of Freiburg, 79104 Freiburg, Germany.
Stefanie KreutmairDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Lena J LippertDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Justus DuysterDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany.
Anna L IllertDepartment of Hematology and Oncology, Freiburg University Medical Center, Albert-Ludwigs-University of Freiburg, 79106 Freiburg, Germany. lena.illert@uniklinik-freiburg.de.
University of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anaplastic large-cell lymphoma (ALCL) is an aggressive non-Hodgkin lymphoma that shows in 60% of cases a translocation t(2;5)(p23;q35), which leads to the expression of the oncogenic kinase NPM-ALK. The nuclear interaction partner of ALK (NIPA) defines an E3-SCF ligase that contributes to the timing of mitotic entry. It has been shown that co-expression of NIPA and NPM-ALK results in constitutive NIPA phosphorylation. By mass spectrometry-based proteomics we identified nine serine/threonine residues to be significantly upregulated in NIPA upon NPM-ALK expression. Generation of phospho-deficient mutants of the respective phospho-residues specified five serine/threonine residues (Ser-338, Ser-344, Ser-370, Ser-381 and Thr-387) as key phosphorylation sites involved in NPM-ALK-directed phosphorylation of NIPA. Analysis of the biological impact of NIPA phosphorylation by NPM-ALK demonstrated that the ALK-induced phosphorylation does not change the SCF

Indexed as

Adaptor Proteins, Signal TransducingCell Cycle ProteinsCell LineFlow CytometryHumansImmunoprecipitationLymphoma, Large-Cell, AnaplasticMicroscopy, FluorescenceNuclear ProteinsPhosphoproteinsPhosphorylationProteomicsSerineSignal TransductionThreonineAdaptor Proteins, Signal TransducingCell Cycle ProteinsNuclear ProteinsPhosphoproteinsSerineThreonineZC3HC1 protein, humanALCLNIPA (ZC3HC1)NPM-ALKphosphoproteomics

Identifiers

PMID31434245
PMCPMC6721280
OpenAlexW2969761618

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.