Evidence map›Paper›PMID 31433055›Full record

ArticleNeuro-oncology2020

Patient-derived xenografts of central nervous system metastasis reveal expansion of aggressive minor clones.

Ben Yi Tew, Christophe Legendre, Mark A Schroeder, Tim Triche, Gerald C Gooden, Yizhou Huang, Loren Butry, Daniel J Ma, Kyle Johnson, Rae Anne Martinez and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuro-oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. ATM-Inhibitor AZD1390 Is a Radiosensitizer for Breast Cancer CNS Metastasis.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 2 countries.

Ben Yi TewDepartment of Translational Genomics, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Christophe LegendreTranslational Genomics Institute (TGEN), Phoenix, Arizona, USA.
Mark A SchroederDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota, USA.
Tim TricheCenter of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan, USA.
Gerald C GoodenDepartment of Translational Genomics, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Yizhou HuangCenter of Epigenetics, Van Andel Research Institute, Grand Rapids, Michigan, USA.
Loren ButryGeisinger Medical Center, Danville, Pennsylvania, USA.
Daniel J MaDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota, USA.
Kyle JohnsonTranslational Genomics Institute (TGEN), Phoenix, Arizona, USA.
Rae Anne MartinezTranslational Genomics Institute (TGEN), Phoenix, Arizona, USA.
Mariaelena PierobonCenter for Applied Proteomics and Molecular Medicine, George Mason University, Fairfax, Virginia, USA.
Emanuel F PetricoinCenter for Applied Proteomics and Molecular Medicine, George Mason University, Fairfax, Virginia, USA.
Joyce O'shaughnessyBaylor University Medical Center, Texas Oncology, US Oncology, Dallas, Texas, USA.
Cindy OsborneBaylor University Medical Center, Texas Oncology, US Oncology, Dallas, Texas, USA.
Coya TapiaDepartment of Molecular Pathology, The MD Anderson Cancer Center, Houston, Texas, USA.
David N BuckleyDepartment of Translational Genomics, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Jennifer GlenUniversity Health Network, Toronto, Ontario, Canada.
Mark BernsteinLifespan, Providence, RI.
Jann N SarkariaDepartment of Radiation Oncology, Mayo Clinic, Rochester, Minnesota, USA.
Steven A TomsGeisinger Medical Center, Danville, Pennsylvania, USA.
Bodour SalhiaDepartment of Translational Genomics, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Translational Genomics Research Institute · USMayo Clinic · USUniversity of Southern California · USGeorge Mason University · USVan Andel Institute · USBaylor University Medical Center · USGeisinger Medical Center · USLifespan · USProvidence College · USTexas Oncology · USThe University of Texas MD Anderson Cancer Center · USUniversity Health Network · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe dearth of relevant tumor models reflecting the heterogeneity of human central nervous system metastasis (CM) has hindered development of novel therapies.

methodsWe established 39 CM patient-derived xenograft (PDX) models representing the histological spectrum, and performed phenotypic and multi-omic characterization of PDXs and their original patient tumors. PDX clonal evolution was also reconstructed using allele-specific copy number and somatic variants.

resultsPDXs retained their metastatic potential, with flank-implanted PDXs forming spontaneous metastases in multiple organs, including brain, and CM subsequent to intracardiac injection. PDXs also retained the histological and molecular profiles of the original patient tumors, including retention of genomic aberrations and signaling pathways. Novel modes of clonal evolution involving rapid expansion by a minor clone were identified in 2 PDXs, including CM13, which was highly aggressive in vivo forming multiple spontaneous metastases, including to brain. These PDXs had little molecular resemblance to the patient donor tumor, including reversion to a copy number neutral genome, no shared nonsynonymous mutations, and no correlation by gene expression.

conclusionsWe generated a diverse and novel repertoire of PDXs that provides a new set of tools to enhance our knowledge of CM biology and improve preclinical testing. Furthermore, our study suggests that minor clone succession may confer tumor aggressiveness and potentiate brain metastasis.

Indexed as

Disease Models, AnimalHeterograftsAnimalsBrain NeoplasmsClone CellsFemaleHumansMiceanimal modelcentral nervous system metastasisclonal evolutionpatient-derived xenograft

Identifiers

PMID31433055
PMCPMC6954401
OpenAlexW2969951593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.