Evidence map›Paper›PMID 31432656›Full record

ArticleJournal of biomedical optics2019

Three-dimensional nucleus-to-cytoplasm ratios provide better discrimination of normal and lung adenocarcinoma cells than in two dimensions.

Hsu-Cheng Huang, Shu-Jen Chiang, Shu-Han Wen, Pei-Jung Lee, Huei-Wen Chen, Yang-Fang Chen, Chen-Yuan Dong

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hsu-Cheng HuangNational Taiwan University, Department of Physics, Taipei, Taiwan.
Shu-Jen ChiangNational Taiwan University, Department of Physics, Taipei, Taiwan.
Shu-Han WenNational Taiwan University, Department of Physics, Taipei, Taiwan.
Pei-Jung LeeNational Taiwan University, College of Medicine, Graduate Institute of Toxicology, Taipei, Taiwan.
Huei-Wen ChenNational Taiwan University, College of Medicine, Graduate Institute of Toxicology, Taipei, Taiwan.
Yang-Fang ChenNational Taiwan University, Department of Physics, Taipei, Taiwan.
Chen-Yuan DongNational Taiwan University, Department of Physics, Taipei, Taiwan.
National Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We acquired multiphoton images of normal and lung adenocarcinoma cell lines in three dimensions. Image stacks of the cells were then processed to obtain nucleus-to-cytoplasm (N/C) ratios in two and three dimensions. While N/C ratios in three dimensions can be unambiguously determined from the volumetric ratios of the nucleus and cytoplasm, two-dimensional (2-D) N/C can vary depending on the axial plane selected for N/C ratio determination. We determined 2-D N/C ratios from three criteria: (1) axial position at which the nuclear area is the largest; (2) the largest 2-D N/C ratio value; and (3) axial position at the midpoint of nuclear axial position. We found that different definitions of 2-D N/C ratio will significantly affect its value. Furthermore, in general, larger variance was found in 2-D rather than three-dimensional (3-D) N/C ratios. Lack of ambiguity in definition and reduced variance suggest that 3-D N/C ratio is a better parameter for characterizing tumor cells in the clinical setting.

Indexed as

Cell NucleusCytoplasmImaging, Three-DimensionalAdenocarcinoma of LungCell Line, TumorColorHumansImage Processing, Computer-AssistedLung NeoplasmsMicroscopy, FluorescenceNeoplasm MetastasisTomography, Optical Coherencelung cancernucleus-to-cytoplasm -ratioopticstwo-photon microscopy

Identifiers

PMID31432656
PMCPMC6983472
OpenAlexW2969926022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.