Evidence map›Paper›PMID 31432621›Full record

ArticleEMBO reports2019

The ubiquitin-conjugating enzyme UBE2QL1 coordinates lysophagy in response to endolysosomal damage.

Lisa Koerver, Chrisovalantis Papadopoulos, Bin Liu, Bojana Kravic, Giulia Rota, Lukas Brecht, Tineke Veenendaal, Mira Polajnar, Anika Bluemke, Michael Ehrmann and 4 more

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 121 citations in OpenAlex.

  1. Review
  2. Selective autophagy in kidney health and disease.Nature reviews. Nephrology · 2026
    Review
  3. Review
  4. Review
  5. Article
  6. Lysosomal homeostasis at the crossroads of neurodegeneration.The Journal of clinical investigation · 2026
    Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Cell-Type-Specific Autophagy in Human Leukocytes.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  18. Article
  19. Lysosomal Repair in Health and Disease.Journal of cellular physiology · 2025
    Review
  20. Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Lisa KoerverFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Chrisovalantis PapadopoulosFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Bin LiuCell Death and Metabolism Unit, Center for Autophagy, Recycling and Disease, Danish Cancer Society Research Center, Copenhagen, Denmark.ORCID 0000-0001-7489-9125
Bojana KravicFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Giulia RotaFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Lukas BrechtMunich Cluster for Systems Neurology (SyNergy), Ludwig-Maximilians-Universität München, München, Germany.
Tineke VeenendaalSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.
Mira PolajnarMunich Cluster for Systems Neurology (SyNergy), Ludwig-Maximilians-Universität München, München, Germany.
Anika BluemkeFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Michael EhrmannFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Judith KlumpermanSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.
Marja JäätteläCell Death and Metabolism Unit, Center for Autophagy, Recycling and Disease, Danish Cancer Society Research Center, Copenhagen, Denmark.ORCID 0000-0001-5950-7111
Christian BehrendsMunich Cluster for Systems Neurology (SyNergy), Ludwig-Maximilians-Universität München, München, Germany.ORCID 0000-0002-9184-7607
Hemmo MeyerFaculty of Biology, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.ORCID 0000-0003-1883-1796
University of Duisburg-Essen · DEMunich Cluster for Systems Neurology · DEDanish Cancer Society · DKUtrecht University · NL

Funding

Boehringer Ingelheim FoundationDanish National Research Foundation DNRF125Deutsche Forschungsgemeinschaft CRC1177Deutsche Forschungsgemeinschaft EXC2145Deutsche Forschungsgemeinschaft Me1626/4-2Deutsche Forschungsgemeinschaft Me1626/5-1EC|FP7|FP7 Ideas: European Research Council FP7 Ideas AdG 340751
6 · The paper itself

Abstract

The autophagic clearance of damaged lysosomes by lysophagy involves extensive modification of the organelle with ubiquitin, but the underlying ubiquitination machinery is still poorly characterized. Here, we use an siRNA screening approach and identify human UBE2QL1 as a major regulator of lysosomal ubiquitination, lysophagy, and cell survival after lysosomal damage. UBE2QL1 translocates to permeabilized lysosomes where it associates with damage sensors, ubiquitination targets, and lysophagy effectors. UBE2QL1 knockdown reduces ubiquitination and accumulation of the critical autophagy receptor p62 and abrogates recruitment of the AAA-ATPase VCP/p97, which is essential for efficient lysophagy. Crucially, it affects association of LC3B with damaged lysosomes indicating that autophagosome formation was impaired. Already in unchallenged cells, depletion of UBE2QL1 leads to increased lysosomal damage, mTOR dissociation from lysosomes, and TFEB activation pointing to a role in lysosomal homeostasis. In line with this, mutation of the homologue ubc-25 in Caenorhabditis elegans exacerbates lysosome permeability in worms lacking the lysosome stabilizing protein SCAV-3/LIMP2. Thus, UBE2QL1 coordinates critical steps in the acute endolysosomal damage response and is essential for maintenance of lysosomal integrity.

Indexed as

AutophagyAdenosine TriphosphatasesAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell SurvivalEndosomesGalectinsHeLa CellsHumansLysineLysosomesMicrotubule-Associated ProteinsNuclear ProteinsPermeabilityRNA, Small InterferingAdenosine TriphosphatasesCaenorhabditis elegans ProteinsGalectinsLysineMAP1LC3A protein, humanMicrotubule-Associated ProteinsNuclear Proteinsp97 ATPaseRNA, Small InterferingSequestosome-1 ProteinSQSTM1 protein, humanUBC-25 protein, C elegansUBE2QL1 protein, humanUbiquitinUbiquitin-Conjugating EnzymesUbiquitinsautophagymTORp97TAX1BP1ubiquitin-conjugating enzyme

Identifiers

PMID31432621
PMCPMC6776906
OpenAlexW2969219058

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.