Evidence map›Paper›PMID 31432254›Full record

ArticleWorld journal of microbiology & biotechnology2019

Virgicin, a novel lanthipeptide from Virgibacillus sp. strain AK90 exhibits inhibitory activity against Gram-positive bacteria.

Vasundhera Gupta, Shelley Sardul Singh, Chandni Sidhu, Vishakha Grover, Anil Kumar Pinnaka, Suresh Korpole

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Saudi journal of biological sciences · 2022
    Article
  5. Bacteriocins: Properties and potential use as antimicrobials.Journal of clinical laboratory analysis · 2022
    Review
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Vasundhera GuptaCSIR-Institute of Microbial Technology, Sector 39A, Chandigarh, 160036, India.
Shelley Sardul SinghCSIR-Institute of Microbial Technology, Sector 39A, Chandigarh, 160036, India.
Chandni SidhuCSIR-Institute of Microbial Technology, Sector 39A, Chandigarh, 160036, India.
Vishakha GroverDr. Harvansh Singh Judge Institute of Dental Sciences and Hospital, Panjab University, Chandigarh, India.
Anil Kumar PinnakaCSIR-Institute of Microbial Technology, Sector 39A, Chandigarh, 160036, India. apinnaka@imtech.res.in.
Suresh KorpoleCSIR-Institute of Microbial Technology, Sector 39A, Chandigarh, 160036, India. suresh@imtech.res.in.
Institute of Microbial Technology · INPanjab University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is a significant increase in the discovery of new antimicrobial compounds in recent past to combat drug resistant pathogens. Members of the genus Bacillus and related genera have been screened extensively due to their ability to produce wide range of antimicrobial compounds. In this study, we have isolated and characterized a new antimicrobial peptide from a marine bacterium identified as Virgibacillus species. The low molecular mass and stability of the antimicrobial substance pointed towards the bacteriocinogenic nature of the compound. The RAST analysis of genome sequence showed presence of a putative bacteriocin biosynthetic cluster containing genes necessary for synthesis of a lanthipeptide. Translated amino acid sequence of mature C-terminal propeptide showed identity with salivaricin A (52.2%) and lacticin A (33.3%). Accordingly, the mass (2417 Da) obtained by MALDI analysis was in agreement with posttranslational modifications of the leader peptide to yield three methyl lanthionine rings and a disulfide bond between two free cysteine residues. The lanthipeptide was named as virgicin, which selectively inhibited the growth of Gram-positive bacteria and biofilm formation by Enterococcus faecalis. Inhibition of biofilm formation by E. faecalis was also observed in in vitro model experiments using hydroxyapatite discs. Thus, virgicin appears to be a promising new bacteriocin to control oral biofilm formation by selective pathogens.

Indexed as

BacteriocinsBiofilmsBiosynthetic PathwaysEnterococcus faecalisGenome, BacterialMolecular WeightMultigene FamilyPeptidesSeawaterSequence Analysis, DNASequence Homology, Amino AcidSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationVirgibacillusBacteriocinsPeptidesBiofilmEnterococcus faecalisLanthipeptideStaphylococcus aureusVirgibacillusVirgicin

Identifiers

PMID31432254
OpenAlexW2969408495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.