Evidence map›Paper›PMID 31431503›Full record

ArticleThe Journal of biological chemistry2019

The ribonucleoside AICAr induces differentiation of myeloid leukemia by activating the ATR/Chk1 via pyrimidine depletion.

Vilma Dembitz, Barbara Tomic, Ivan Kodvanj, Julian A Simon, Antonio Bedalov, Dora Visnjic

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Vilma DembitzDepartment of Physiology and Croatian Institute for Brain Research, School of Medicine, University of Zagreb, 10 000 Zagreb, Croatia.ORCID 0000-0002-9463-253X
Barbara TomicDepartment of Physiology and Croatian Institute for Brain Research, School of Medicine, University of Zagreb, 10 000 Zagreb, Croatia.
Ivan KodvanjDepartment of Physiology and Croatian Institute for Brain Research, School of Medicine, University of Zagreb, 10 000 Zagreb, Croatia.
Julian A SimonClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109.
Antonio BedalovClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109.
Dora VisnjicDepartment of Physiology and Croatian Institute for Brain Research, School of Medicine, University of Zagreb, 10 000 Zagreb, Croatia visnjic@mef.hr.ORCID 0000-0003-2207-7191
University of Zagreb · HRFred Hutch Cancer Center · US

Funding

Origin firing at repetitive sequences and genome replication - Admin SupplementR01GM117446 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDALOV, ANTONIO · 2016 to 2023
$4.3M
SIRT2 Inhibitors for the Treatment of B-cell LymphomaR01CA206462 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDALOV, ANTONIO, SIMON, JULIAN · 2016 to 2020
$2.9M
NCI NIH HHS R01 CA206462NIGMS NIH HHS R01 GM117446
6 · The paper itself

Abstract

Metabolic pathways play important roles in proliferation and differentiation of malignant cells. 5-Aminoimidazole-4-carboxamide ribonucleoside (AICAr), a precursor in purine biosynthesis and a well-established activator of AMP-activated protein kinase (AMPK), induces widespread metabolic alterations and is commonly used for dissecting the role of metabolism in cancer. We have previously reported that AICAr promotes differentiation and inhibits proliferation of myeloid leukemia cells. Here, using metabolic assays, immunoblotting, flow cytometry analyses, and siRNA-mediated gene silencing in leukemia cell lines, we show that AICAr-mediated differentiation was independent of the known metabolic effects of AMPK, including glucose consumption, but instead depends on the activation of the DNA damage-associated enzyme checkpoint kinase 1 (Chk1) induced by pyrimidine depletion. LC/MS/MS metabolomics analysis revealed that AICAr increases orotate levels and decreases uridine monophosphate (UMP) levels, consistent with inhibition of UMP synthesis at a step downstream of dihydroorotate dehydrogenase (DHODH). AICAr and the DHODH inhibitor brequinar had similar effects on differentiation markers and S-phase arrest, and genetic or pharmacological Chk1 inactivation abrogated both of these effects. Our results delineate an AMPK-independent effect of AICAr on myeloid leukemia differentiation that involves perturbation of pyrimidine biosynthesis and activation of the DNA damage response network.

Indexed as

Cell DifferentiationAminoimidazole CarboxamideAMP-Activated Protein KinasesCell Line, TumorCheckpoint Kinase 1Dihydroorotate DehydrogenaseHumansLeukemia, Promyelocytic, AcuteOxidoreductases Acting on CH-CH Group DonorsPyrimidinesRibonucleosidesS Phase Cell Cycle CheckpointsacadesineAminoimidazole CarboxamideAMP-Activated Protein KinasesCheckpoint Kinase 1CHEK1 protein, humanDihydroorotate DehydrogenaseOxidoreductases Acting on CH-CH Group DonorspyrimidinePyrimidinesRibonucleosidesAICArAMLAMP-activated kinase (AMPK)cell cyclecell differentiationChk1DNA damage responseleukemianucleotidepyrimidine

Identifiers

PMID31431503
PMCPMC6802504
OpenAlexW2969363258

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.