Evidence map›Paper›PMID 31430885›Full record

ReviewInternational journal of molecular sciences2019

Control of Translation at the Initiation Phase During Glucose Starvation in Yeast.

Yoshika Janapala, Thomas Preiss, Nikolay E Shirokikh

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
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  15. Increased mesoscale diffusivity in response to acute glucose starvation.bioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Editorial: RNA machines.Frontiers in genetics · 2023
    Article
  18. Article
  19. Article
  20. Translational control in cell ageing: an update.Biochemical Society transactions · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yoshika JanapalaEMBL-Australia Collaborating Group, Department of Genome Sciences, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT 2601, Australia.
Thomas PreissEMBL-Australia Collaborating Group, Department of Genome Sciences, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT 2601, Australia. thomas.preiss@anu.edu.au.ORCID 0000-0001-6273-784X
Nikolay E ShirokikhEMBL-Australia Collaborating Group, Department of Genome Sciences, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT 2601, Australia. nikolay.shirokikh@anu.edu.au.

Funding

Australian Research Council DP180100111Cancer Council ACT APP1120469
6 · The paper itself

Abstract

Glucose is one of the most important sources of carbon across all life. Glucose starvation is a key stress relevant to all eukaryotic cells. Glucose starvation responses have important implications in diseases, such as diabetes and cancer. In yeast, glucose starvation causes rapid and dramatic effects on the synthesis of proteins (mRNA translation). Response to glucose deficiency targets the initiation phase of translation by different mechanisms and with diverse dynamics. Concomitantly, translationally repressed mRNAs and components of the protein synthesis machinery may enter a variety of cytoplasmic foci, which also form with variable kinetics and may store or degrade mRNA. Much progress has been made in understanding these processes in the last decade, including with the use of high-throughput/omics methods of RNA and RNA:protein detection. This review dissects the current knowledge of yeast reactions to glucose starvation systematized by the stage of translation initiation, with the focus on rapid responses. We provide parallels to mechanisms found in higher eukaryotes, such as metazoans, for the most critical responses, and point out major remaining gaps in knowledge and possible future directions of research on translational responses to glucose starvation.

Indexed as

AnimalsCodon, InitiatorFungal ProteinsGene Expression Regulation, FungalGlucosePeptide Chain Initiation, TranslationalRNA, MessengerYeastsCodon, InitiatorFungal ProteinsGlucoseRNA, Messenger5’UTReIFeukaryotic protein synthesis controleukaryotic translationglucose starvationmRNAmRNPnutrient stressrapid response to stressribosomestress granulesstress responsetranslation initiationtranslation mechanismsUTR

Identifiers

PMID31430885
PMCPMC6720308

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.