ArticleFuture generations computer systems : FGCS2019
I-TASSER gateway: A protein structure and function prediction server powered by XSEDE.
Article in Future generations computer systems : FGCS, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.
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Who cites it
54 citing papers in PubMed.
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- From AI-AssistedPharmaceuticals (Basel, Switzerland) · 2025Review
- Dual-loaded niosome-dendrimer nanoplatform enhances Tirapazamine delivery to hypoxic breast cancer cells.Scientific reports · 2025Article
- Enhanced Methodology for Peptide Tertiary Structure Prediction Using GRSA and Bio-Inspired Algorithm.International journal of molecular sciences · 2025Article
- Functional Characterization of an Aldol Condensation Synthase PheG for the Formation of Hispidin from Phellinus Igniarius.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Decoding the cross-immune pressure: Dengue's role in SARS-CoV-2 evolution.Computational and structural biotechnology journal · 2025Article
- Insight into Protein Engineering: FromCurrent pharmaceutical design · 2025Review
- Novel prophylactic and therapeutic multi-epitope vaccine based on Ag85A, Ag85B, ESAT-6, and CFP-10 of Mycobacterium tuberculosis using an immunoinformatics approach.Osong public health and research perspectives · 2024Article
- Design of multi-epitope vaccine candidate based on OmpA, CarO and ZnuD proteins against multi-drug resistantHeliyon · 2024Article
- Computational exploration ofBiochemistry and biophysics reports · 2024Article
- Recent Progress of Protein Tertiary Structure Prediction.Molecules (Basel, Switzerland) · 2024Review
- Venomics Reveals the Venom Complexity of Sea AnemoneMarine drugs · 2024Article
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- BeEM: fast and faithful conversion of mmCIF format structure files to PDB format.BMC bioinformatics · 2023Article
- Rational Design of Daunorubicin C-14 Hydroxylase Based on the Understanding of Its Substrate-Binding Mechanism.International journal of molecular sciences · 2023Article
- Pan-Genomics ofLife (Basel, Switzerland) · 2023Article
- Application Experiences on a GPU-Accelerated Arm-based HPC Testbed.The proceedings of International Conference on High Performance Computing in Asia-Pacific Region (HPC Asia 2023 Workshops) : 27 February to 2 March 2023, Singapore. International Conference/Exhibition on High-Performance Computing in th... · 2023Article
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Authors and funding
4 authors.
Funding
Abstract
There is an increasing gap between the number of known protein sequences and the number of proteins with experimentally characterized structure and function. To alleviate this issue, we have developed the I-TASSER gateway, an online server for automated and reliable protein structure and function prediction. For a given sequence, I-TASSER starts with template recognition from a known structure library, followed by full-length atomic model construction by iterative assembly simulations of the continuous structural fragments excised from the template alignments. Functional insights are then derived from comparative matching of the predicted model with a library of proteins with known function. The I-TASSER pipeline has been recently integrated with the XSEDE Gateway system to accommodate pressing demand from the user community and increasing computing costs. This report summarizes the configuration of the I-TASSER Gateway with the XSEDE-Comet supercomputer cluster, together with an overview of the I-TASSER method and milestones of its development.
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