Evidence map›Paper›PMID 31427781›Full record

ArticleNature biomedical engineering2019

Reconfigurable open microfluidics for studying the spatiotemporal dynamics of paracrine signalling.

Jiaquan Yu, Erwin Berthier, Alexandria Craig, Theodorus E de Groot, Sidney Sparks, Patrick N Ingram, David F Jarrard, Wei Huang, David J Beebe, Ashleigh B Theberge

Abstract read
In one paragraph

Article in Nature biomedical engineering, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Review
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  4. Article
  5. Review
  6. Article
  7. Review
  8. Suspended Tissue Engineering with Assemblable Microfluidics (STEAM).bioRxiv : the preprint server for biology · 2025
    Article
  9. Suspended Tissue Open Microfluidic Patterning (STOMP).Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  10. Suspended Tissue Open Microfluidic Patterning (STOMP).bioRxiv : the preprint server for biology · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Microphysiological systems as models for immunologically 'cold' tumors.Frontiers in cell and developmental biology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jiaquan YuDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.ORCID http://orcid.org/0000-0002-2998-2226
Erwin BerthierDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.
Alexandria CraigDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.
Theodorus E de GrootDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.
Sidney SparksDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.
Patrick N IngramDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA.
David F JarrardCarbone Cancer Center, University of Wisconsin-Madison, Madison, WI, USA.
Wei HuangDepartment of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.
David J BeebeDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA. djbeebe@wisc.edu.ORCID http://orcid.org/0000-0002-0415-9006
Ashleigh B ThebergeDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA. abt1@uw.edu.ORCID http://orcid.org/0000-0002-3394-1435

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Wisconsin Multidisciplinary K12 Urologic Research Career Development ProgramK12DK100022 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI CHAD M. VEZINA · 2013 to 2026
$8.6M
RESEARCH TRAINING IN HEMATOLOGYT32HL007899 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Jane Ellen Churpek · 1998 to 2026
$8.2M
Theberge Admin Supp Undergraduate Summer Research ExperiencesR35GM128648 · NIGMS · UNIVERSITY OF WASHINGTON · PI Ashleigh Brooks Theberge · 2018 to 2026
$4.7M
[PQC-3] A Metabolic Pathway Activation Marker for Prostate Cancer PrognosisR01CA185251 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BASU, HIRAK S., BEEBE, DAVID J · 2014 to 2017
$2.9M
Understanding cell migration through microscale in vitro modelsR01EB010039 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI BEEBE, DAVID J, HUTTENLOCHER, ANNA · 2011 to 2014
$1.7M
NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA185251NHLBI NIH HHS T32 HL007899NIBIB NIH HHS R01 EB010039NIDDK NIH HHS K12 DK100022NIGMS NIH HHS R35 GM128648
6 · The paper itself

Abstract

The study of intercellular signalling networks requires organotypic microscale systems that facilitate the culture, conditioning and manipulation of cells. Here, we describe a reconfigurable microfluidic cell-culture system that facilitates the assembly of three-dimensional tissue models by stacking layers that contain preconditioned microenvironments. By using principles of open and suspended microfluidics, the Stacks system is easily assembled or disassembled to provide spatial and temporal manoeuvrability in two-dimensional and three-dimensional assays of multiple cell types, enabling the modelling of sequential paracrine-signalling events, such as tumour-cell-mediated differentiation of macrophages and macrophage-facilitated angiogenesis. We used Stacks to recapitulate the in vivo observation that different prostate cancer tissues polarize macrophages with distinct gene-expression profiles of pro-inflammatory and anti-inflammatory cytokines. Stacks also enabled us to show that these two types of macrophages signal distinctly to endothelial cells, leading to blood vessels with different morphologies. Our proof-of-concept experiments exemplify how Stacks can efficiently model multicellular interactions and highlight the importance of spatiotemporal specificity in intercellular signalling.

Indexed as

Signal TransductionSpatio-Temporal AnalysisCell Culture TechniquesCytokinesEndothelial CellsHumansMacrophagesMicrofluidic Analytical TechniquesMicrofluidicsTranscriptomeTumor MicroenvironmentCytokines

Identifiers

PMID31427781
PMCPMC7543914

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.