Evidence map›Paper›PMID 31427728›Full record

ArticleNature microbiology2019

T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly.

Jinhong Hu, Liam J Worrall, Marija Vuckovic, Chuan Hong, Wanyin Deng, Claire E Atkinson, B Brett Finlay, Zhiheng Yu, Natalie C J Strynadka

Abstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 72 citations in OpenAlex.

  1. How Salmonella Works Under Osmotic and Desiccation Stresses.Comprehensive reviews in food science and food safety · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Targeting Type III Secretion System usingIndian journal of microbiology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. A Tale aboutMicroorganisms · 2023
    Review
  12. Review
  13. Article
  14. Review
  15. Assembly and architecture of the type III secretion sorting platform.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Cryo-EM of the injectisome and type III secretion systems.Current opinion in structural biology · 2022
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Jinhong HuDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Liam J WorrallDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Marija VuckovicDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Chuan HongCryoEM Shared Resources, Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Wanyin DengMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
Claire E AtkinsonDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
B Brett FinlayDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Zhiheng YuCryoEM Shared Resources, Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Natalie C J StrynadkaDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada. ncjs@mail.ubc.ca.ORCID http://orcid.org/0000-0002-4058-9425
University of British Columbia · CAHoward Hughes Medical Institute · USMerck & Co., Inc., Rahway, NJ, USA (United States) · USUniversity of British Columbia Hospital · CA

Funding

CIHR
6 · The paper itself

Abstract

The bacterial injectisome is a syringe-shaped macromolecular nanomachine utilized by many pathogenic Gram-negative bacteria, including the causative agents of plague, typhoid fever, whooping cough, sexually transmitted infections and major nosocomial infections. Bacterial proteins destined for self-assembly and host-cell targeting are translocated by the injectisome in a process known as type III secretion (T3S). The core structure is the ~4 MDa needle complex (NC), built on a foundation of three highly oligomerized ring-forming proteins that create a hollow scaffold spanning the bacterial inner membrane (IM) (24-mer ring-forming proteins PrgH and PrgK in the Salmonella enterica serovar Typhimurium Salmonella pathogenicity island 1 (SPI-1) type III secretion system (T3SS)) and outer membrane (OM) (15-mer InvG, a member of the broadly conserved secretin pore family). An internalized helical needle projects from the NC and bacterium, ultimately forming a continuous passage to the host, for delivery of virulence effectors. Here, we have captured snapshots of the entire prototypical SPI-1 NC in four distinct needle assembly states, including near-atomic resolution, and local reconstructions in the absence and presence of the needle. These structures reveal the precise localization and molecular interactions of the internalized SpaPQR 'export apparatus' complex, which is intimately encapsulated and stabilized within the IM rings in the manner of a nanodisc, and to which the PrgJ rod directly binds and functions as an initiator and anchor of needle polymerization. We also describe the molecular details of the extensive and continuous coupling interface between the OM secretin and IM rings, which is remarkably facilitated by a localized 16-mer stoichiometry in the periplasmic-most coupling domain of the otherwise 15-mer InvG oligomer.

Indexed as

Bacterial ProteinsCryoelectron MicroscopyModels, MolecularProtein MultimerizationSalmonella typhimuriumType III Secretion SystemsBacterial ProteinsType III Secretion Systems

Identifiers

PMID31427728
OpenAlexW2968993574

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.