Evidence map›Paper›PMID 31426274›Full record

ArticleInternational journal of molecular sciences2019

Transgenerational Perpetuation of CHS Gene Expression and DNA Methylation Status Induced by Short Oligodeoxynucleotides in Flax (

Magdalena Dzialo, Jan Szopa, Agata Hnitecka, Magdalena Zuk

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Magdalena DzialoDepartment of Genetic Biochemistry, Faculty of Biotechnology, Wroclaw University, Przybyszewskiego 63, 51-148 Wroclaw, Poland.ORCID 0000-0003-2846-2074
Jan SzopaDepartment of Genetic Biochemistry, Faculty of Biotechnology, Wroclaw University, Przybyszewskiego 63, 51-148 Wroclaw, Poland.
Agata HniteckaDepartment of Genetic Biochemistry, Faculty of Biotechnology, Wroclaw University, Przybyszewskiego 63, 51-148 Wroclaw, Poland.
Magdalena ZukDepartment of Genetic Biochemistry, Faculty of Biotechnology, Wroclaw University, Przybyszewskiego 63, 51-148 Wroclaw, Poland. mzuk@ibmb.uni.wroc.pl.ORCID 0000-0003-3343-9303
University of Wrocław · PL

Funding

National Science Centre 2013/11/B/NZ9/00150National Science Centre 2016/23/N/NZ9/01619
6 · The paper itself

Abstract

Over two decades ago, short oligodeoxynucleotides (ODNs) were proven to be an effective and rapid technique for analysis of gene function without interference in the plant genome. Our previous research has shown the successful regulation of chalcone synthase (CHS) gene expression in flax by ODN technology. The CHS gene encodes a pivotal enzyme in flavonoid biosynthesis. The manipulation of its transcript level was the result of the specific methylation status developed after treatment with ODNs. In further analysis of the application of oligodeoxynucleotides in plants, we will focus on maintaining the methylation status induced originally by ODNs homologous to the regulatory regions of the CHS gene in flax. This article reports the latest investigation applied to stabilization and inheritance of the epigenetic marks induced by plants' treatment with ODNs. The methylation status was analyzed in the particular CCGG motifs located in the CHS gene sequence. Individual plants were able to maintain alterations induced by ODNs. In order to confirm the impact of methylation marks on the nucleosome rearrangement, chromatin accessibility assay was performed. The perpetuation of targeted plant modulation induced by ODNs exhibits strong potential for improving crops and intensified application for medicine, nutrition and industry.

Indexed as

DNA MethylationAcyltransferasesBase SequenceEpigenesis, GeneticFlaxGene Expression Regulation, PlantGenetic EngineeringOligodeoxyribonucleotidesPlant ProteinsPlants, Genetically ModifiedAcyltransferasesflavanone synthetaseOligodeoxyribonucleotidesPlant Proteinschalcone synthasechromatin accessibilityepigenetic inheritancegenetic engineeringmethylationODNs

Identifiers

PMID31426274
PMCPMC6719086
OpenAlexW2967876721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.