Evidence map›Paper›PMID 31424193›Full record

ArticleACS chemical neuroscience2019

A Novel Bromine-Containing Paroxetine Analogue Provides Mechanistic Clues for Binding Ambiguity at the Central Primary Binding Site of the Serotonin Transporter.

Rachel D Slack, Ara M Abramyan, Helen Tang, Sitaram Meena, Bruce A Davis, Alessandro Bonifazi, JoLynn B Giancola, Jeffrey R Deschamps, Sett Naing, Hideaki Yano and 3 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical neuroscience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Efficient pecG-International journal of molecular sciences · 2025
    Article
  2. Article
  3. Dynamic extracellular vestibule of human SERT: Unveiling druggable potential with high-affinity allosteric inhibitors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Rachel D SlackMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Ara M AbramyanMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Helen TangMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Sitaram MeenaDepartment of Cellular and Molecular Physiology , Yale University School of Medicine , 333 Cedar Street , New Haven , Connecticut 06520 , United States.
Bruce A DavisDepartment of Cellular and Molecular Physiology , Yale University School of Medicine , 333 Cedar Street , New Haven , Connecticut 06520 , United States.
Alessandro BonifaziMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.ORCID 0000-0002-7306-0114
JoLynn B GiancolaMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Jeffrey R DeschampsNaval Research Laboratory , Code 6030, 4555 Overlook Avenue , Washington D. C. 20375 , United States.
Sett NaingMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Hideaki YanoMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.
Satinder K SinghDepartment of Cellular and Molecular Physiology , Yale University School of Medicine , 333 Cedar Street , New Haven , Connecticut 06520 , United States.ORCID 0000-0001-7917-9944
Amy Hauck NewmanMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.ORCID 0000-0001-9065-4072
Lei ShiMolecular Targets and Medications Discovery Branch , National Institute on Drug Abuse - Intramural Research Program, National Institutes of Health , 333 Cassell Drive , Baltimore , Maryland 21224 , United States.ORCID 0000-0002-4137-096X
National Institutes of Health · USYale University · USUnited States Naval Research Laboratory · US

Funding

Structural basis for the functions of dopamine receptors, neurotransmitter transporters, and sigma 1 receptorZIADA000606 · NIDA · NATIONAL INSTITUTE ON DRUG ABUSE · PI SHI, LEI · 2015 to 2025
$20.5M
Structure and Function of a Serotonin TransporterR01MH100688 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2014 to 2018
$2.9M
Monoamine Transporter NanoprobesZIADA000610 · NIDA · NATIONAL INSTITUTE ON DRUG ABUSE · PI NEWMAN, AMY HAUCK · 2016 to 2020
$2.5M
Transport and Inhibition in a Biogenic Amine TransporterR00MH083050 · NIMH · YALE UNIVERSITY · PI SINGH, SATINDER KAUR · 2010 to 2012
$736k
Intramural NIH HHS ZIA DA000606Intramural NIH HHS ZIA DA000610NIDA NIH HHS ZIA DA000606NIDA NIH HHS ZIA DA000610NIMH NIH HHS R00 MH083050NIMH NIH HHS R01 MH100688
6 · The paper itself

Abstract

The serotonin transporter (SERT) is the primary target for the selective serotonin reuptake inhibitors (SSRIs). However, the structural basis for the extraordinarily high binding affinity of the widely prescribed SSRI, paroxetine, to human SERT (hSERT) has not yet been fully elucidated. Our previous findings unveiled a plausible ambiguity in paroxetine's binding orientations that may constitute an integral component of this SSRI's high affinity for hSERT. Herein, we investigate factors contributing to paroxetine's high affinity by modifying both the ligand and the protein. We generated a series of bromine (Br)-containing derivatives and found that the one in which the 4-F of paroxetine had been replaced with the chemically similar but more electron-rich Br atom (

Indexed as

Binding SitesBromineCrystallography, X-RayHEK293 CellsHeLa CellsHumansParoxetineProtein BindingSelective Serotonin Reuptake InhibitorsSerotonin Plasma Membrane Transport ProteinsBromineParoxetineSelective Serotonin Reuptake InhibitorsSerotonin Plasma Membrane Transport Proteinsasymmetric chemistryorganocatalysisParoxetineselective serotonin reuptake inhibitorsserotonin transporterstructure−activity relationship

Identifiers

PMID31424193
PMCPMC8272913
OpenAlexW2969888145

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.