Evidence map›Paper›PMID 31423512›Full record

ArticleSaudi medical journal2019

Identification of FBXW7α-regulated genes in M1-polarized macrophages in colorectal cancer by RNA sequencing.

Yupeng Long, Yujun Zhu

Open access · diamondAbstract read
In one paragraph

Article in Saudi medical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yupeng LongDepartment of Clinical Laboratory, Army 958 Hospital of the Chinese People's Liberation Army, Chongqing, China. E-mail. lyp_emily@163.com.
Yujun Zhu
Chinese People's Liberation Army · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo determine the FBXW7α-regulated genes in tumor-polarized macrophages in colorectal cancer.

methodsThis experimental study was performed between June 2017 and March 2019. FBXW7α siRNA transfected RAW264.7 cells, together with the control group, were co-cultured with the colon cancer cell line, Colon-26. M1  marker production from the macrophages was determined by ELISA and quantitative reverse transcription-polymerase chain reaction. Whole genomic differential expression between the FBXW7α siRNA group and the control group were determined by RNA-sequencing analysis. The target site of the microRNA-205 gene was predicted using Targetscan and was verified by the luciferase assay. By transfecting mimics or inhibitors of microRNA-205, we explored the role of FBXW7α/microRNA-205 axis in regulating the polarization of tumor-associated macrophages (TAM).

resultsFBXW7α knockdown in RAW264.7 enhanced the expression of cyclooxigenase (COX)-2 and inducible nitric oxide synthase (iNOS), mRNA expression and IL6, IL12, p40, and tumor necrosis factor-α (TNFα) production upon co-culture with Colon-26 cells in vitro. Further, compared with the control group, 648 genes in total were enhanced and 416 targets were downregulated in FBXW7α siRNA transfected cells, among which miR-205 was the most significantly upregulated. SMAD1 was identified as an miR-205 target. The FBXW7α/miR-205 axis might regulate TAM polarization by affecting SMAD1 expression.

conclusionThese results prove that the FBXW7α/miR-205 axis plays an important role in TAM polarization and could facilitate further exploration of its molecular mechanism.

Indexed as

AnimalsCell Line, TumorCoculture TechniquesColorectal NeoplasmsCyclooxygenase 2F-Box-WD Repeat-Containing Protein 7Gene Expression Regulation, NeoplasticGene Knockdown TechniquesInterleukin-12Interleukin-6MacrophagesMiceMicroRNAsNitric Oxide Synthase Type IIRAW 264.7 CellsReceptors, G-Protein-CoupledCyclooxygenase 2F-Box-WD Repeat-Containing Protein 7FBXW7 protein, humanInterleukin-12Interleukin-6interleukin-6, mouseLancl1 protein, mouseMicroRNAsMIRN205 microRNA, mouseNitric Oxide Synthase Type IINos2 protein, mousePtgs2 protein, mouseReceptors, G-Protein-CoupledRNA, MessengerSmad1 ProteinSmad1 protein, mouseTumor Necrosis Factor-alpha

Identifiers

PMID31423512
PMCPMC6718864
OpenAlexW2967975511

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.