Evidence map›Paper›PMID 31423298›Full record

ArticleAntimicrobial resistance and infection control2019

Early-life gut microbiome modulation reduces the abundance of antibiotic-resistant bacteria.

Giorgio Casaburi, Rebbeca M Duar, Daniel P Vance, Ryan Mitchell, Lindsey Contreras, Steven A Frese, Jennifer T Smilowitz, Mark A Underwood

2 registry-linked trialsOpen access · goldAbstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02457338 naactive not recruitingnot on this map

Infant Supplementation With Probiotic Bifidobacterium Longum Subsp. Infantis Study

TypeinterventionalSponsorUniversity of California, DavisRan2014 to 2027Enrolled120ConditionsHealthyArmsBifidobacterium
NCT04662619 nacompletednot on this mapstarted 2020, after this paper: background citation

A Proof-of-Concept, Randomized, Double-Blind, Placebo-Controlled, Two-Arm, Parallel-Group, Nutritional Intervention Study to Examine the Clinical and Immunological Effects of a Probiotic Food Supplement Containing B. Infantis (EVC001) in Healthy Breastfed Infants at Risk of Developing Atopic Dermatitis

TypeinterventionalSponsorJohnson & Johnson Consumer Inc. (J&JCI)Ran2020 to 2024Enrolled273ConditionsHealthyArmsB. infantis, Lactose Placebo
3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it, 99 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. CAMEO: a CAZyme mapping engine optimized for HUMAnN.Microbiology resource announcements · 2026
    Article
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  17. Understanding the influence of the microbiome on childhood infections.Expert review of anti-infective therapy · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Giorgio CasaburiEvolve Biosystems, Inc, Davis, CA 95618 USA.
Rebbeca M DuarEvolve Biosystems, Inc, Davis, CA 95618 USA.
Daniel P VanceEvolve Biosystems, Inc, Davis, CA 95618 USA.
Ryan MitchellEvolve Biosystems, Inc, Davis, CA 95618 USA.
Lindsey ContrerasEvolve Biosystems, Inc, Davis, CA 95618 USA.
Steven A FreseEvolve Biosystems, Inc, Davis, CA 95618 USA.
Jennifer T Smilowitz *3Department of Food Science and Technology, University of California, Davis, CA 95616 USA.
Mark A Underwood *4Foods for Health Institute, University of California, Davis, CA 95616 USA.ORCID 0000-0003-2053-5830
LungLife AI (United States) · USUC Davis Children's Hospital · USUniversity of California, Davis · USUniversity of Nebraska–Lincoln · US

Funding

Pacific Biosciences PacBio RS Single Molecule Real Time SequencerS10OD018174 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROKHSAR, DANIEL SOLEYMAN · 2014 to 2014
$600k
NIH HHS S10 OD018174
6 · The paper itself

Abstract

Background: Antibiotic-resistant (AR) bacteria are a global threat. AR bacteria can be acquired in early life and have long-term sequelae. Limiting the spread of antibiotic resistance without triggering the development of additional resistance mechanisms is of immense clinical value. Here, we show how the infant gut microbiome can be modified, resulting in a significant reduction of AR genes (ARGs) and the potentially pathogenic bacteria that harbor them. Methods: The gut microbiome was characterized using shotgun metagenomics of fecal samples from two groups of healthy, term breastfed infants. One group was fed Results: Infants fed Conclusions: Colonization of the gut of breastfed infants by a single strain of Trial registration: This clinical trial was registered at ClinicalTrials.gov, NCT02457338.

Indexed as

Drug Resistance, MicrobialAnti-Bacterial AgentsBacteriabeta-LactamasesBifidobacterium longum subspecies infantisBreast FeedingCase-Control StudiesFecesGastrointestinal MicrobiomeHigh-Throughput Nucleotide SequencingHumansInfant, NewbornMetagenomicsMicrobial Sensitivity TestsProbioticsWhole Genome SequencingAnti-Bacterial Agentsbeta-LactamasesAntibiotic resistance geneHost-microbe interactionsMetagenomicsMicrobiologyProbiotics

Identifiers

PMID31423298
PMCPMC6693174
OpenAlexW2967608930

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.