Evidence map›Paper›PMID 31420578›Full record

ArticleScientific reports2019

Distinct microbial communities that differ by race, stage, or breast-tumor subtype in breast tissues of non-Hispanic Black and non-Hispanic White women.

Alana Smith, Joseph F Pierre, Liza Makowski, Elizabeth Tolley, Beverly Lyn-Cook, Lu Lu, Gregory Vidal, Athena Starlard-Davenport

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 5 pooled it
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 5 syntheses or guidelines pooled it, 112 citations in OpenAlex.

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30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Alana SmithDepartment of Genetics, Genomics and Informatics, Memphis, TN, USA.
Joseph F PierreDepartment of Pediatrics, University of Tennessee Health Science Center, Memphis, TN, USA.
Liza MakowskiDepartment of Medicine, University of Tennessee Health Science Center, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-5337-8037
Elizabeth TolleyDepartment of Preventive Medicine, University of Tennessee Health Science Center, Memphis, TN, USA.
Beverly Lyn-CookDivision of Biochemical Toxicology, FDA/National Center for Toxicological Research, Jefferson, AR, USA.
Lu LuDepartment of Genetics, Genomics and Informatics, Memphis, TN, USA.
Gregory VidalWest Cancer Center, Memphis, TN, USA.
Athena Starlard-DavenportDepartment of Genetics, Genomics and Informatics, Memphis, TN, USA. astarlar@uthsc.edu.ORCID http://orcid.org/0000-0002-8938-237X
Institut thématique Génétique, génomique et bioinformatique · FRUniversity of Tennessee Health Science Center · USNational Center for Toxicological Research · USWest Cancer Center · US

Funding

MicroRNA-based epigenetic approach to induce fetal hemoglobinR01HL144641 · NHLBI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI STARLARD-DAVENPORT, ATHENA · 2020 to 2022
$928k
NHLBI NIH HHS R01 HL144641
6 · The paper itself

Abstract

Growing evidence highlights an association between an imbalance in the composition and abundance of bacteria in the breast tissue (referred as microbial dysbiosis) and breast cancer in women. However, studies on the breast tissue microbiome have not been conducted in non-Hispanic Black (NHB) women. We investigated normal and breast cancer tissue microbiota from NHB and non-Hispanic White (NHW) women to identify distinct microbial signatures by race, stage, or tumor subtype. Using 16S rRNA gene sequencing, we observed that phylum Proteobacteria was most abundant in normal (n = 8), normal adjacent to tumor (normal pairs, n = 11), and breast tumors from NHB and NHW women (n = 64), with fewer Firmicutes, Bacteroidetes, and Actinobacteria. Breast tissues from NHB women had a higher abundance of genus Ralstonia compared to NHW tumors, which could explain a portion of the breast cancer racial disparities. Analysis of tumor subtype revealed enrichment of family Streptococcaceae in TNBC. A higher abundance of genus Bosea (phylum Proteobacteria) increased with stage. This is the first study to identify racial differences in the breast tissue microbiota between NHB and NHW women. Further studies on the breast cancer microbiome are necessary to help us understand risk, underlying mechanisms, and identify potential microbial targets.

Indexed as

ActinobacteriaAdolescentAdultAgedAnimalsBacillotaBacteroidetesBlack PeopleBreast NeoplasmsCase-Control StudiesDysbiosisFemaleHumansMammary Glands, AnimalMicrobiotaMiddle AgedRNA, Ribosomal, 16S

Identifiers

PMID31420578
PMCPMC6697683
OpenAlexW2967862731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.