Evidence map›Paper›PMID 31420537›Full record

ArticleNature communications2019

Heterogeneity in respiratory electron transfer and adaptive iron utilization in a bacterial biofilm.

Yuxuan Qin, Yinghao He, Qianxuan She, Philip Larese-Casanova, Pinglan Li, Yunrong Chai

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 110 citations in OpenAlex.

  1. Root colonization by beneficial rhizobacteria.FEMS microbiology reviews · 2024
    Pooled it
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  3. Biocontrol of mushroom crop mycoparasites by novelbioRxiv : the preprint server for biology · 2026
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  6. Review
  7. Animals : an open access journal from MDPI · 2025
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  10. Article
  11. Article
  12. Review
  13. Improving Beneficial Traits inPlants (Basel, Switzerland) · 2024
    Article
  14. Article
  15. Diagnostics (Basel, Switzerland) · 2024
    Article
  16. A new ROS response factor YvmB protectsApplied and environmental microbiology · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Yuxuan QinBeijing Advanced Innovation Center for Food Nutrition and Human Health, Key Laboratory of Functional Dairy, College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.ORCID http://orcid.org/0000-0001-7671-3718
Yinghao HeDepartment of Biology, Northeastern University, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0003-1249-6667
Qianxuan SheDepartment of Biology, Northeastern University, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-7928-5285
Philip Larese-CasanovaDepartment of Civil and Environmental Engineering, Northeastern University, Boston, MA, 02115, USA.
Pinglan LiBeijing Advanced Innovation Center for Food Nutrition and Human Health, Key Laboratory of Functional Dairy, College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China. lipinglan@cau.edu.cn.
Yunrong ChaiDepartment of Biology, Northeastern University, Boston, MA, 02115, USA. y.chai@northeastern.edu.
Northeastern University · USMinistry of Education · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Bacillus subtilis, robust biofilm formation requires large quantities of ferric iron. Here we show that this process requires preferential production of a siderophore precursor, 2,3-dihydroxybenzoate, instead of the siderophore bacillibactin. A large proportion of iron is associated extracellularly with the biofilm matrix. The biofilms are conductive, with extracellular iron potentially acting as electron acceptor. A relatively small proportion of ferric iron is internalized and boosts production of iron-containing enzymes involved in respiratory electron transfer and establishing strong membrane potential, which is key to biofilm matrix production. Our study highlights metabolic diversity and versatile energy generation strategies within B. subtilis biofilms.

Indexed as

BiofilmsElectron TransportBacillus subtilisBacterial ProteinsCitric Acid CycleGlycolysisHydroxybenzoatesIronMembrane PotentialsOligopeptidesRepressor ProteinsSiderophores2,3-dihydroxybenzoic acidbacillibactinBacterial Proteinsferric uptake regulating proteins, bacterialHydroxybenzoatesIronOligopeptidesRepressor ProteinsSiderophores

Identifiers

PMID31420537
PMCPMC6697725
OpenAlexW2966914006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.