Evidence map›Paper›PMID 31420302›Full record

ArticleEBioMedicine2019

Discriminating schizophrenia using recurrent neural network applied on time courses of multi-site FMRI data.

Weizheng Yan, Vince Calhoun, Ming Song, Yue Cui, Hao Yan, Shengfeng Liu, Lingzhong Fan, Nianming Zuo, Zhengyi Yang, Kaibin Xu and 15 more

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 5 pooled it
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 5 syntheses or guidelines pooled it, 175 citations in OpenAlex.

  1. Pooled it
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  16. Bridging Gaps in Sundown Syndrome Research: a Scoping Review and Roadmap for Future Multimodal Approaches.Archives of clinical neuropsychology : the official journal of the National Academy of Neuropsychologists · 2025
    Article
  17. Review
  18. Article
  19. Unraveling the Neural Landscape of Mental Disorders Using Double Functional Independent Primitives.Biological psychiatry. Cognitive neuroscience and neuroimaging · 2025
    Article
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 8 institutions in 3 countries.

Weizheng YanNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Vince CalhounTri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS) Center, Atlanta 30303, GA, USA.
Ming SongNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Yue CuiNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Hao YanPeking University Sixth Hospital, Institute of Mental Health, Beijing 100191, China; Key Laboratory of Mental Health, Ministry of Health, Peking University, Beijing 100191, China.
Shengfeng LiuNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Lingzhong FanNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Nianming ZuoNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Zhengyi YangNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Kaibin XuNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Jun YanPeking University Sixth Hospital, Institute of Mental Health, Beijing 100191, China; Key Laboratory of Mental Health, Ministry of Health, Peking University, Beijing 100191, China.
Luxian LvDepartment of Psychiatry, Henan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, Xinxiang 453002, Henan, China; Henan Key Lab of Biological Psychiatry, Xinxiang Medical University, Xinxiang 453002, Henan, China.
Jun ChenDepartment of Radiology, Renmin Hospital of Wuhan University, Wuhan 430060, Hubei, China.
Yunchun ChenDepartment of Psychiatry, Xijing Hospital, The Fourth Military Medical University, Xi'an 710032, Shaanxi, China.
Hua GuoZhumadian Psychiatric Hospital, Zhumadian 463000, Henan, China.
Peng LiPeking University Sixth Hospital, Institute of Mental Health, Beijing 100191, China; Key Laboratory of Mental Health, Ministry of Health, Peking University, Beijing 100191, China.
Lin LuPeking University Sixth Hospital, Institute of Mental Health, Beijing 100191, China; Key Laboratory of Mental Health, Ministry of Health, Peking University, Beijing 100191, China.
Ping WanZhumadian Psychiatric Hospital, Zhumadian 463000, Henan, China.
Huaning WangDepartment of Psychiatry, Xijing Hospital, The Fourth Military Medical University, Xi'an 710032, Shaanxi, China.
Huiling WangDepartment of Radiology, Renmin Hospital of Wuhan University, Wuhan 430060, Hubei, China.
Yongfeng YangDepartment of Psychiatry, Henan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, Xinxiang 453002, Henan, China; Henan Key Lab of Biological Psychiatry, Xinxiang Medical University, Xinxiang 453002, Henan, China; Key Laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, Sichuan, China.
Hongxing ZhangDepartment of Psychiatry, Henan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, Xinxiang 453002, Henan, China; Department of Psychology, Xinxiang Medical University, Xinxiang 453002, Henan, China.
Dai ZhangPeking University Sixth Hospital, Institute of Mental Health, Beijing 100191, China; Key Laboratory of Mental Health, Ministry of Health, Peking University, Beijing 100191, China; Center for Life Sciences/PKU-IDG/McGovern Institute for Brain Research, Peking University, Beijing 100871, China.
Tianzi JiangNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, Sichuan, China; Queensland Brain Institute, University of Queensland, Brisbane 4072, QLD, Australia; CAS Center for Excellence in Brain Science and Intelligence Technology, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China. Electronic address: jiangtz@nlpr.ia.ac.cn.
Jing SuiNational Laboratory of Pattern Recognition and Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; University of Chinese Academy of Sciences, Beijing 100049, China; CAS Center for Excellence in Brain Science and Intelligence Technology, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China. Electronic address: jing.sui@nlpr.ia.ac.cn.
Chinese Academy of Sciences · CNPeking University · CNWuhan University · CNHenan Psychiatric Hospital · CNUniversity of Electronic Science and Technology of China · CNZhumadian Central Hospital · CNCenter for Translational Research in Neuroimaging and Data Science · USXijing Hospital · CN

Funding

Data-driven approaches to identify biomarkers from multimodal imaging big dataR01MH117107 · NIMH · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D · 2019 to 2022
$1.6M
NIMH NIH HHS R01 MH117107
6 · The paper itself

Abstract

backgroundCurrent fMRI-based classification approaches mostly use functional connectivity or spatial maps as input, instead of exploring the dynamic time courses directly, which does not leverage the full temporal information.

methodsMotivated by the ability of recurrent neural networks (RNN) in capturing dynamic information of time sequences, we propose a multi-scale RNN model, which enables classification between 558 schizophrenia and 542 healthy controls by using time courses of fMRI independent components (ICs) directly. To increase interpretability, we also propose a leave-one-IC-out looping strategy for estimating the top contributing ICs.

findingsAccuracies of 83·2% and 80·2% were obtained respectively for the multi-site pooling and leave-one-site-out transfer classification. Subsequently, dorsal striatum and cerebellum components contribute the top two group-discriminative time courses, which is true even when adopting different brain atlases to extract time series.

interpretationThis is the first attempt to apply a multi-scale RNN model directly on fMRI time courses for classification of mental disorders, and shows the potential for multi-scale RNN-based neuroimaging classifications. FUND: Natural Science Foundation of China, the Strategic Priority Research Program of the Chinese Academy of Sciences, National Institutes of Health Grants, National Science Foundation.

Indexed as

Magnetic Resonance ImagingNeural Networks, ComputerSchizophrenic PsychologyAdolescentAdultBrainCase-Control StudiesData Interpretation, StatisticalHumansMiddle AgedROC CurveSchizophreniaYoung AdultCerebellumDeep learningfMRIMulti-site classificationRecurrent neural network (RNN)SchizophreniaStriatum

Identifiers

PMID31420302
PMCPMC6796503
OpenAlexW2967967941

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.