Evidence map›Paper›PMID 31419955›Full record

ArticleBMC nephrology2019

A novel single amino acid deletion impairs fibronectin function and causes familial glomerulopathy with fibronectin deposits: case report of a family.

Maria Luíza Gonçalves Dos Reis Monteiro, Fabiano Bichuette Custódio, Precil Diego Miranda de Menezes Neves, Frederico Moraes Ferreira, Elieser Hitoshi Watanabe, Antônio Marcondes Lerário, Liliane Silvano de Araújo, Bruno Eduardo Pedroso Balbo, Vívian Christine Dourado Pinto, Lívia Maria Gruli Barbosa and 4 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC nephrology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Maria Luíza Gonçalves Dos Reis MonteiroNephropathology Service, Federal University of Triângulo Mineiro, Praça Manoel Terra, 330 - Bairro Abadia, Uberaba, MG, 38015-050, Brazil.
Fabiano Bichuette CustódioNephrology Service, Federal University of Triângulo Mineiro, Uberaba, MG, Brazil.
Precil Diego Miranda de Menezes NevesDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Frederico Moraes FerreiraLaboratory of Immunology, Heart Institute, University of São Paulo, São Paulo, SP, Brazil.
Elieser Hitoshi WatanabeDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Antônio Marcondes LerárioDivision of Endocrinology, University of Michigan, Ann Arbor, USA.
Liliane Silvano de AraújoNephropathology Service, Federal University of Triângulo Mineiro, Praça Manoel Terra, 330 - Bairro Abadia, Uberaba, MG, 38015-050, Brazil.
Bruno Eduardo Pedroso BalboDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Vívian Christine Dourado PintoDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Lívia Maria Gruli BarbosaDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Vilmar de Paiva MarquesNephrology Service, Federal University of Triângulo Mineiro, Uberaba, MG, Brazil.
Juliana Reis MachadoNephropathology Service, Federal University of Triângulo Mineiro, Praça Manoel Terra, 330 - Bairro Abadia, Uberaba, MG, 38015-050, Brazil.
Marlene Antônia ReisNephropathology Service, Federal University of Triângulo Mineiro, Praça Manoel Terra, 330 - Bairro Abadia, Uberaba, MG, 38015-050, Brazil. mareispatologia@gmail.com.
Luiz Fernando OnuchicDivisions of Nephrology and Molecular Medicine, University of São Paulo School of Medicine, São Paulo, SP, Brazil.
Universidade Federal do Triângulo Mineiro · BRUniversidade de São Paulo · BRUniversidade Federal de São Paulo · BRUniversity of Michigan–Ann Arbor · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlomerulopathy with fibronectin deposits is an autosomal dominant disease associated with proteinuria, hematuria, hypertension and renal function decline. Forty percent of the cases are caused by mutations in FN1, the gene that encodes fibronectin. CASE PRESENTATION: This report describes two cases of Glomerulopathy with fibronectin deposits, involving a 47-year-old father and a 14-year-old son. The renal biopsies showed glomeruli with endocapillary hypercellularity and large amounts of mesangial and subendothelial eosinophilic deposits. Immunohistochemistry for fibronectin was markedly positive. Whole exome sequencing identified a novel FN1 mutation that leads to an amino-acid deletion in both patients (Ile1988del), a variant that required primary amino-acid sequence analysis for assessment of pathogenicity. Our primary sequence analyses revealed that Ile1988 is very highly conserved among relative sequences and is positioned in a C-terminal FN3 domain containing heparin- and fibulin-1-binding sites. This mutation was predicted as deleterious and molecular mechanics simulations support that it can change the tertiary structure and affect the complex folding and its molecular functionality.

conclusionThe current report not only documents the occurrence of two GFND cases in an affected family and deeply characterizes its anatomopathological features but also identifies a novel pathogenic mutation in FN1, analyzes its structural and functional implications, and supports its pathogenicity.

Indexed as

MutationAdolescentFibronectinsGlomerulonephritis, MembranoproliferativeHumansKidney GlomerulusMaleMiddle AgedPedigreeSequence Analysis, ProteinFibronectinsFN1 protein, humanFibronectin depositsGlomerulopathyPathogenic mutationProtein structure analysis; whole exome sequencing

Identifiers

PMID31419955
PMCPMC6697944
OpenAlexW2968570631

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.