Evidence map›Paper›PMID 31419944›Full record

ArticleBMC plant biology2019

Comparative secretome analysis of different smut fungi and identification of plant cell death-inducing secreted proteins from Tilletia horrida.

Aijun Wang, Linxiu Pan, Xianyu Niu, Xinyue Shu, Xiaoqun Yi, Naoki Yamamoto, Shuangcheng Li, Qiming Deng, Jun Zhu, Yueyang Liang and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Functional Analyses of a Small Secreted Cysteine-Rich Protein ThSCSP_14 inInternational journal of molecular sciences · 2022
    Article
  8. ThSCSP_12: Novel Effector inInternational journal of molecular sciences · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Identification of the Novel Effector RsIA_NP8 inFrontiers in microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Aijun WangRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Linxiu PanRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Xianyu NiuRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Xinyue ShuRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Xiaoqun YiRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Naoki YamamotoRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Shuangcheng LiRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Qiming DengRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Jun ZhuRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Yueyang LiangRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Lingxia WangRice Research Institute of Sichuan Agricultural University, Chengdu, China.
Ping LiRice Research Institute of Sichuan Agricultural University, Chengdu, China. liping6575@163.com.
Aiping ZhengRice Research Institute of Sichuan Agricultural University, Chengdu, China. apzh0602@gmail.com.
Sichuan Agricultural University · CNMinistry of Agriculture · CARice Research Institute · CN

Funding

National Natural Science Foundation of China-Yunnan Joint Fund National Natural Science Foundation of China
6 · The paper itself

Abstract

backgroundTilletia horrida is a basidiomycete fungus that causes rice kernel smut, one of the most important rice diseases in hybrid rice growing areas worldwide. However, little is known about its mechanisms of pathogenicity. We previously reported the genome of T. horrida, and 597 genes that encoded secreted proteins were annotated. Among these were some important effector genes related to pathogenicity.

resultsA secretome analysis suggested that five Tilletia fungi shared more gene families than were found in other smuts, and there was high conservation between them. Furthermore, we screened 597 secreted proteins from the T. horrida genome, some of which induced expression in host-pathogen interaction processes. Through transient expression, we demonstrated that two putative effectors could induce necrosis phenotypes in Nicotiana benthamiana. These two encoded genes were up-regulated during early infection, and the encoded proteins were confirmed to be secreted using a yeast secretion system. For the putative effector gene smut_5844, a signal peptide was required to induce non-host cell death, whereas ribonuclease catalytic active sites were required for smut_2965. Moreover, both putative effectors could induce an immune response in N. benthamiana leaves. Interestingly, one of the identified potential host interactors of smut_5844 was laccase-10 protein (OsLAC10), which has been predicted to be involved in plant lignification and iron metabolism.

conclusionsOverall, this study identified two secreted proteins in T. horrida that induce cell death or are involved in defense machinery in non-host plants. This research provides a useful foundation for understanding the interaction between rice and T. horrida.

Indexed as

Cell DeathBasidiomycotaFungal ProteinsHost-Pathogen InteractionsNicotianaOryzaPlant DiseasesFungal ProteinsCell-deathEffector proteinsRNase active siteSignal peptidesTilletia horridaYeast two-hybrid

Identifiers

PMID31419944
PMCPMC6697988
OpenAlexW2968159277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.