Evidence map›Paper›PMID 31419247›Full record

ArticlePloS one2019

Fast and robust phase-shift estimation in two-dimensional structured illumination microscopy.

Jorge Sola-Pikabea, Arcadi Garcia-Rius, Genaro Saavedra, Jorge Garcia-Sucerquia, Manuel Martínez-Corral, Emilio Sánchez-Ortiga

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jorge Sola-PikabeaDepartment of Optics, 3D Imaging and Display Laboratory, Universitat of València, Valencia (Burjassot), Spain.ORCID 0000-0003-2954-2498
Arcadi Garcia-RiusDepartment of Optics, 3D Imaging and Display Laboratory, Universitat of València, Valencia (Burjassot), Spain.ORCID 0000-0002-4961-1027
Genaro SaavedraDepartment of Optics, 3D Imaging and Display Laboratory, Universitat of València, Valencia (Burjassot), Spain.
Jorge Garcia-SucerquiaSchool of Physics, Universidad Nacional de Colombia, Sede Medellin, Medellin, Colombia.
Manuel Martínez-CorralDepartment of Optics, 3D Imaging and Display Laboratory, Universitat of València, Valencia (Burjassot), Spain.
Emilio Sánchez-OrtigaDepartment of Optics, 3D Imaging and Display Laboratory, Universitat of València, Valencia (Burjassot), Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A method of determining unknown phase-shifts between elementary images in two-dimensional Structured Illumination Microscopy (2D-SIM) is presented. The proposed method is based on the comparison of the peak intensity of spectral components. These components correspond to the inherent structured illumination spectral content and the residual component that appears from wrongly estimated phase-shifts. The estimation of the phase-shifts is carried out by finding the absolute maximum of a function defined as the normalized peak intensity difference in the Fourier domain. This task is performed by an optimization method providing a fast estimation of the phase-shift. The algorithm stability and robustness are tested for various levels of noise and contrasts of the structured illumination pattern. Furthermore, the proposed approach reduces the number of computations compared to other existing techniques. The method is supported by the theoretical calculations and validated by means of simulated and experimental results.

Indexed as

Image Processing, Computer-AssistedAlgorithmsFourier AnalysisMicroscopy, FluorescenceSignal-To-Noise Ratio

Identifiers

PMID31419247
PMCPMC6697343

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.