Evidence map›Paper›PMID 31417155›Full record

ArticleThe ISME journal2019

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions.

Natalia García-García, Javier Tamames, Alexandra M Linz, Carlos Pedrós-Alió, Fernando Puente-Sánchez

Abstract read
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed.

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  17. Trait-Based Life History Strategies Shape Bacterial Niche Breadth.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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  18. Ecology and evolution · 2025
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21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Natalia García-GarcíaMicrobiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, C/Darwin no. 3, Campus de Cantoblanco, 28049, Madrid, Spain.
Javier TamamesMicrobiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, C/Darwin no. 3, Campus de Cantoblanco, 28049, Madrid, Spain.
Alexandra M LinzGreat Lakes Bioenergy Research Center, University of Wisconsin-Madison, 1552 University Avenue, Madison, WI, 53726, USA.
Carlos Pedrós-AlióMicrobiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, C/Darwin no. 3, Campus de Cantoblanco, 28049, Madrid, Spain.
Fernando Puente-SánchezMicrobiome Analysis Laboratory, Systems Biology Department, Centro Nacional de Biotecnología, CSIC, C/Darwin no. 3, Campus de Cantoblanco, 28049, Madrid, Spain. fpuente@cnb.csic.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microdiversity can lead to different ecotypes within the same species. These are assumed to provide stability in time and space to those species. However, the role of microdiversity in the stability of whole microbial communities remains underexplored. Understanding the drivers of microbial community stability is necessary to predict community response to future disturbances. Here, we analyzed 16S rRNA gene amplicons from eight different temperate bog lakes at the 97% OTU and amplicon sequence variant (ASV) levels and found ecotypes within the same OTU with different distribution patterns in space and time. We observed that these ecotypes are adapted to different values of environmental factors such as water temperature and oxygen concentration. Our results showed that the existence of several ASVs within a OTU favored its persistence across changing environmental conditions. We propose that microdiversity aids the stability of microbial communities in the face of fluctuations in environmental factors.

Indexed as

EcosystemMicrobiotaBacteriaDNA, BacterialLakesPhylogenyRNA, Ribosomal, 16SDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID31417155
PMCPMC6864100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.