Evidence map›Paper›PMID 31417090›Full record

ArticleNature communications2019

Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis.

Jeffrey Vedanayagam, Walid K Chatila, Bülent Arman Aksoy, Sonali Majumdar, Anders Jacobsen Skanderup, Emek Demir, Nikolaus Schultz, Chris Sander, Eric C Lai

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
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  4. Rare child primary intracranial sarcoma associated with DICER1 mutation: a case report and review of the literature.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2026
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  18. Germline Pathogenic DROSHA Variants Are Linked to Pineoblastoma and Wilms Tumor Predisposition.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Jeffrey VedanayagamDepartment of Developmental Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.ORCID http://orcid.org/0000-0002-5013-7860
Walid K ChatilaDepartment of Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.
Bülent Arman AksoyDepartment of Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.ORCID http://orcid.org/0000-0002-0135-2505
Sonali MajumdarDepartment of Developmental Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.
Anders Jacobsen SkanderupDepartment of Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.ORCID http://orcid.org/0000-0001-6847-4980
Emek DemirDepartment of Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA.
Nikolaus SchultzMarie-Josee and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
Chris SanderDepartment of Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA. sander.research@gmail.com.ORCID http://orcid.org/0000-0001-6059-6270
Eric C LaiDepartment of Developmental Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, 10065, USA. laie@mskcc.org.ORCID http://orcid.org/0000-0002-8432-5851
Memorial Sloan Kettering Cancer Center · USAgency for Science, Technology and Research · SG

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
MSKCC Center for Translational Cancer Genomic AnalysisU24CA143840 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI LADANYI, MARC, SANDER, CHRIS · 2009 to 2016
$11.5M
Selective regulatory and biogenesis mechanisms for microRNAsR01GM083300 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Eric C Lai · 2007 to 2026
$9.8M
Molecular and genetic analysis of novel Slicer-dependent miRNA pathways in bloodR01HL135564 · NHLBI · SLOAN-KETTERING INST CAN RESEARCH · PI KHARAS, MICHAEL, LAI, ERIC C · 2017 to 2020
$2.9M
NCI NIH HHS P30 CA008748NCI NIH HHS U24 CA143840NHLBI NIH HHS R01 HL135564NIGMS NIH HHS R01 GM083300
6 · The paper itself

Abstract

Somatic mutations in the RNase IIIb domain of DICER1 arise in cancer and disrupt the cleavage of 5' pre-miRNA arms. Here, we characterize an unstudied, recurrent, mutation (S1344L) in the DICER1 RNase IIIa domain in tumors from The Cancer Genome Atlas (TCGA) project and MSK-IMPACT profiling. RNase IIIa/b hotspots are absent from most cancers, but are notably enriched in uterine cancers. Systematic analysis of TCGA small RNA datasets show that DICER1 RNase IIIa-S1344L tumors deplete 5p-miRNAs, analogous to RNase IIIb hotspot samples. Structural and evolutionary coupling analyses reveal constrained proximity of RNase IIIa-S1344 to the RNase IIIb catalytic site, rationalizing why mutation of this site phenocopies known hotspot alterations. Finally, examination of DICER1 hotspot endometrial tumors reveals derepression of specific miRNA target signatures. In summary, comprehensive analyses of DICER1 somatic mutations and small RNA data reveal a mechanistic aspect of pre-miRNA processing that manifests in specific cancer settings.

Indexed as

Databases, GeneticDEAD-box RNA HelicasesEndometrial NeoplasmsFemaleHumansMicroRNAsMutationRibonuclease IIIDEAD-box RNA HelicasesDICER1 protein, humanMicroRNAsRibonuclease III

Identifiers

PMID31417090
PMCPMC6695490
OpenAlexW2968719262

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.