Evidence map›Paper›PMID 31416893›Full record

ArticleLife science alliance2019

Ncl1-mediated metabolic rewiring critical during metabolic stress.

Ajay Bhat, Rahul Chakraborty, Khushboo Adlakha, Ganesh Agam, Kausik Chakraborty, Shantanu Sengupta

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Flavin-containing monooxygenase (FMO): Beyond xenobiotics.BioEssays : news and reviews in molecular, cellular and developmental biology · 2024
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ajay BhatCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India.ORCID 0000-0001-5021-0864
Rahul ChakrabortyCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India.
Khushboo AdlakhaCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India.
Ganesh AgamCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India.ORCID 0000-0003-1623-4920
Kausik ChakrabortyCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India kausik@igib.in.ORCID 0000-0001-6000-8379
Shantanu SenguptaCouncil of Scientific and Industrial Research-Institute of Genomics and Integrative Biology, New Delhi, India shantanus@igib.res.in.ORCID 0000-0001-8461-0735
Institute of Genomics and Integrative Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nutritional limitation has been vastly studied; however, there is limited knowledge of how cells maintain homeostasis in excess nutrients. In this study, using yeast as a model system, we show that some amino acids are toxic at higher concentrations. With cysteine as a physiologically relevant example, we delineated the pathways/processes that are altered and those that are involved in survival in the presence of elevated levels of this amino acid. Using proteomics and metabolomics approach, we found that cysteine up-regulates proteins involved in amino acid metabolism, alters amino acid levels, and inhibits protein translation-events that are rescued by leucine supplementation. Through a comprehensive genetic screen, we show that leucine-mediated effect depends on a transfer RNA methyltransferase (NCL1), absence of which decouples transcription and translation in the cell, inhibits the conversion of leucine to ketoisocaproate, and leads to tricarboxylic acid cycle block. We therefore propose a role of NCL1 in regulating metabolic homeostasis through translational control.

Indexed as

CysteineGene Expression Regulation, FungalMetabolomicsMicrobial ViabilityProtein BiosynthesisProteomicsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStress, PhysiologicaltRNA MethyltransferasesCysteineNCL1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinstRNA Methyltransferases

Identifiers

PMID31416893
PMCPMC6696984
OpenAlexW2969155350

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.