Evidence map›Paper›PMID 31415219›Full record

ArticleAnnals of the American Thoracic Society2019

Upper Respiratory Dysbiosis with a Facultative-dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant.

Aurea Simon-Soro, Michael B Sohn, John E McGinniss, Ize Imai, Melanie C Brown, Vincent R Knecht, Aubrey Bailey, Erik L Clarke, Edward Cantu, Hongzhe Li and 5 more

Abstract read
In one paragraph

Article in Annals of the American Thoracic Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Pseudomonas-dominant microbiome elicits sustained IL-1β upregulation in alveolar macrophages from lung transplant recipients.The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation · 2023
    Article
  4. The Lung Allograft Microbiome Associates with Pepsin, Inflammation, and Primary Graft Dysfunction.American journal of respiratory and critical care medicine · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. The lung microbiome: progress and promise.The Journal of clinical investigation · 2021
    Review
  9. The lung microbiome in lung transplantation.The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation · 2021
    Review
  10. Observational
  11. Article
  12. Review
  13. Pathobiology of frailty in lung disease.Translational research : the journal of laboratory and clinical medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Aurea Simon-SoroDepartment of Medicine.
Michael B SohnDepartment of Epidemiology, Biostatistics, and Informatics.
John E McGinnissDepartment of Medicine.
Ize ImaiDepartment of Medicine.
Melanie C BrownDepartment of Medicine.
Vincent R KnechtDepartment of Medicine.
Aubrey BaileyDepartment of Microbiology.
Erik L ClarkeDepartment of Microbiology.ORCID 0000-0002-2031-8791
Edward CantuDepartment of Surgery, and.
Hongzhe LiDepartment of Epidemiology, Biostatistics, and Informatics.
Kyle BittingerDepartment of Pediatrics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania; and.
Joshua M DiamondDepartment of Medicine.
Jason D ChristieDepartment of Medicine.
Frederic D BushmanDepartment of Microbiology.
Ronald G CollmanDepartment of Medicine.ORCID 0000-0002-0508-3701

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DAVID S METZGER · 1999 to 2026
$78.6M
Institutional Clinical and Translational Science AwardKL2TR001879 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI MEAGHER, EMMA ANNE · 2016 to 2025
$13.7M
Lung Transplant Microbiome and Chronic Allograft DysfunctionR01HL113252 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BUSHMAN, FREDERIC D, CHRISTIE, JASON D · 2013 to 2016
$2.9M
The Lung DNA Virome in Health and DiseaseR33HL137063 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BUSHMAN, FREDERIC D, COLLMAN, RONALD G · 2019 to 2021
$2.3M
The Lung DNA Virome in Health and DiseaseR61HL137063 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BUSHMAN, FREDERIC D, COLLMAN, RONALD G · 2017 to 2018
$605k
NCATS NIH HHS KL2 TR001879NHLBI NIH HHS R01 HL113252NHLBI NIH HHS R33 HL137063NHLBI NIH HHS R61 HL137063NIAID NIH HHS P30 AI045008
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AdultAgedBacteriaBacterial InfectionsCandidaCase-Control StudiesDNA, Ribosomal SpacerDysbiosisEcotypeFemaleGraft RejectionHumansInvasive Pulmonary AspergillosisLung TransplantationMaleMicrobiotaDNA, Ribosomal SpacerRNA, Ribosomal, 16Sbacteriadysbiosisfungilung transplantationmicrobiome

Identifiers

PMID31415219
PMCPMC6945465

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.