Evidence map›Paper›PMID 31415112›Full record

ArticleJournal of inherited metabolic disease2020

Fetal bovine serum impacts the observed N-glycosylation defects in TMEM165 KO HEK cells.

Dorothée Vicogne, Marine Houdou, Anne Garat, Leslie Climer, Vladimir Lupashin, Willy Morelle, François Foulquier

Abstract read
In one paragraph

Article in Journal of inherited metabolic disease, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Putative role of TMEM165 in congenital cardiomyopathies.Frontiers in molecular neuroscience · 2025
    Review
  4. Insights into the regulation of cellular MnBiochimica et biophysica acta. Molecular basis of disease · 2023
    Article
  5. Chemical factors induce aggregative multicellularity in a close unicellular relative of animals.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Dorothée VicogneCNRS, UMR 8576, Unité de Glycobiologie Structurale et Fonctionnelle (UGSF), Université de Lille, Lille, France.
Marine HoudouCNRS, UMR 8576, Unité de Glycobiologie Structurale et Fonctionnelle (UGSF), Université de Lille, Lille, France.
Anne GaratEA 4483, IMPact de l'Environnement Chimique sur la Santé humaine (IMPECS), Université de Lille, Lille, France.
Leslie ClimerDepartment of Biology, Baylor University, Waco, Texas.
Vladimir LupashinDepartment of Physiology and Biophysics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, Arkansas.
Willy MorelleCNRS, UMR 8576, Unité de Glycobiologie Structurale et Fonctionnelle (UGSF), Université de Lille, Lille, France.
François FoulquierCNRS, UMR 8576, Unité de Glycobiologie Structurale et Fonctionnelle (UGSF), Université de Lille, Lille, France.ORCID 0000-0001-5084-4015
Centre National de la Recherche Scientifique · FRBaylor University · USUniversité de Lille · FRUniversity of Arkansas for Medical Sciences · US

Funding

Characterization of mammalian COG complex-interacting intra-Golgi trafficking macR01GM083144 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI VLADIMIR V LUPASHIN · 2008 to 2026
$6.5M
NIGMS NIH HHS R01 GM083144
6 · The paper itself

Abstract

TMEM165 is involved in a rare genetic human disease named TMEM165-CDG (congenital disorders of glycosylation). It is Golgi localized, highly conserved through evolution and belongs to the uncharacterized protein family 0016 (UPF0016). The use of isogenic TMEM165 KO HEK cells was crucial in deciphering the function of TMEM165 in Golgi manganese homeostasis. Manganese is a major cofactor of many glycosylation enzymes. Severe Golgi glycosylation defects are observed in TMEM165 Knock Out Human Embryonic Kidney (KO HEK) cells and are rescued by exogenous manganese supplementation. Intriguingly, we demonstrate in this study that the observed Golgi glycosylation defect mainly depends on fetal bovine serum, particularly its manganese level. Our results also demonstrate that iron and/or galactose can modulate the observed glycosylation defects in TMEM165 KO HEK cells. While isogenic cultured cells are widely used to study the impact of gene defects on proteins' glycosylation patterns, these results emphasize the importance of the use of validated fetal bovine serum in glycomics studies.

Indexed as

AntiportersCalciumCation Transport ProteinsCongenital Disorders of GlycosylationGlycosylationGolgi ApparatusHEK293 CellsHumansIon TransportManganeseSerum Albumin, BovineAntiportersCalciumCation Transport ProteinsManganeseSerum Albumin, BovineTMEM165 protein, humanFBSmanganese levelN-glycosylation defectsTMEM165

Identifiers

PMID31415112
PMCPMC7021577
OpenAlexW2966903206

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.