Evidence map›Paper›PMID 31414118›Full record

ArticleDatabase : the journal of biological databases and curation2019

PICEAdatabase: a web database for Picea omics and phenotypic information.

Nan Lu, Tianqing Zhu, Fangqun Ouyang, Yan Xia, Qingfen Li, Zirui Jia, Jiwen Hu, Juanjuan Ling, Wenjun Ma, Guijuan Yang and 3 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Database : the journal of biological databases and curation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Nan LuState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Tianqing ZhuState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Fangqun OuyangState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Yan XiaKey Laboratory of Horticulture Science for Southern Mountains Regions of Ministry of Education, College of Horticulture and Landscape Architecture, Southwest University, No.2 Tiansheng Road, Chongqing 400715, China.
Qingfen LiState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Zirui JiaState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Jiwen HuState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Juanjuan LingState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Wenjun MaState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Guijuan YangState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Hanguo ZhangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, No.26 Hexing Road, Harbin 150040, China.
Lisheng KongDepartment of Biology, Centre for Forest Biology, University of Victoria, 3800 Finnerty Road, Victoria BC, V8P 5C2, Canada.
Junhui WangState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, No.1 Dongxiaofu, Xiangshan Road, Beijing 100091, China.
Chinese Academy of Forestry · CNResearch Institute of Forestry · CNNortheast Forestry University · CNSouthwest University · CNUniversity of Victoria · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Picea belongs to the Pinaceae family and is a famous commercial tree species because of its straight trunk and excellent timber traits. Recently, omics have been widely used for fundamental and mechanism studies on Picea plants. To improve the accessibility to omics and phenotypic data and facilitate further studies, we compiled the sequences of 2 chloroplast genomes (Picea crassifolia and Picea asperata) and 32 complete omics data sets, including 20 transcriptomes, 4 proteomes, 2 degradomes and 6 microRNAs from P. crassifolia, P. asperata, Picea balfouriana and Picea abies tissues under different treatments, in PICEAdatabase. In addition, phenotypic data on plant growth and wood property traits were collected from two field trials of P. crassifolia. PICEAdatabase also includes useful analysis tools, such as BLAST, DESeq2 and JBrowse, to assist with analyses.

Indexed as

Databases, Nucleic AcidDatabases, ProteinGenome, ChloroplastPiceaPlant ProteinsGenomicsProteomicsPlant Proteins

Identifiers

PMID31414118
PMCPMC6694207
OpenAlexW2967909176

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.